C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190075 Plod2-005 ENSMUSG00000032374 10090 + 9:92601342-92602617 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000190075
Transcript ID Muscle
ENSMUST00000190075 0.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057Z CIL_00057Z_0002 CGP 9:92457373-92608428
CIL_0005X5 CIL_0005X5_0002 CGP 9:92542223-94538081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282903 PLOD2-001 protein_coding Homo_sapiens 2e-24 119
ENST00000461497 PLOD2-005 protein_coding Homo_sapiens 2e-24 119
ENST00000478436 PLOD2-004 retained_intron Homo_sapiens 5e-31 141
ENST00000494950 PLOD2-003 protein_coding Homo_sapiens 2e-24 119

Loading