C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29428
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190086 RP24-545N23.1-001 ENSMUSG00000100623 10090 + 1:130195980-130196388 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryTestisENSMUST00000190086
Transcript ID Brain Liver Ovary Testis
ENSMUST00000190086 0.030±0.00 0.023±0.00 0.116±0.00 0.303±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VZ CIL_0006VZ_0002 CGP 1:128588199-130219278
CIL_0007SW CIL_0007SW_0002 VISTA 1:129654812-130256885

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000037869 FAM136A-001 protein_coding Homo_sapiens 0 396
ENST00000404728 RP11-9G10.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000428729 FAM136BP-001 processed_pseudogene Homo_sapiens 0 313
ENST00000430566 FAM136A-004 protein_coding Homo_sapiens 0 303
ENST00000440062 DASS-23B5.2-001 processed_pseudogene Homo_sapiens 0 248
ENST00000447383 RP5-996D20.3-001 processed_pseudogene Homo_sapiens 0 309
ENST00000450256 FAM136A-002 protein_coding Homo_sapiens 0 296
ENST00000451654 DASS-23B5.2-001 processed_pseudogene Homo_sapiens 0 254
ENST00000457987 DASS-23B5.2-001 processed_pseudogene Homo_sapiens 0 254
ENST00000460307 FAM136A-003 retained_intron Homo_sapiens 0 302
ENST00000468519 RP11-144C15.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000603263 RP11-51F16.9-001 processed_pseudogene Homo_sapiens 0 311

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