C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alcohol dehydrogenase, iron containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190654 Adhfe1-004 ENSMUSG00000025911 10090 + 1:9548119-9580673 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartMuscleOvaryPlacentaENSMUST00000190654
Transcript ID Bladder Breast Colon Heart Muscle Ovary Placenta
ENSMUST00000190654 0.969±0.00 8.890±0.00 0.518±0.14 5.153±0.23 6.826±1.55 4.458±2.12 0.531±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0002 CGP 1:9545408-9580673
CIL_00031D CIL_00031D_0002 CGP 1:9547948-9627143

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276576 ADHFE1-003 nonsense_mediated_decay Homo_sapiens 0 1424
ENST00000396621 ADHFE1-005 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000396623 ADHFE1-001 protein_coding Homo_sapiens 0 1541
ENST00000415254 ADHFE1-004 protein_coding Homo_sapiens 0 1515
ENST00000419955 ADHFE1-009 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000422166 ADHFE1-008 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000424777 ADHFE1-002 nonsense_mediated_decay Homo_sapiens 0 948
ENST00000426810 ADHFE1-006 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000463261 ADHFE1-014 retained_intron Homo_sapiens 0.0000000003 69
ENST00000466920 ADHFE1-010 retained_intron Homo_sapiens 0 195
ENST00000480040 ADHFE1-015 processed_transcript Homo_sapiens 0 455
ENST00000496501 ADHFE1-007 processed_transcript Homo_sapiens 0 1349
ENST00000518781 ADHFE1-017 processed_transcript Homo_sapiens 0.0000000005 69

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