C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POC1 centriolar protein homolog A (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191434 Poc1a-005 ENSMUSG00000023345 10090 + 9:106281380-106349892 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverOvaryPlacentaTestisENSMUST00000191434
Transcript ID Adipose Adrenal Breast Colon Liver Ovary Placenta Testis
ENSMUST00000191434 0.639±0.00 1.729±0.00 1.672±0.00 2.397±0.39 0.473±0.01 2.582±1.20 7.770±4.88 14.326±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0003674 ND molecular_function
GO:0005814 ISS centriole
GO:0008150 ND biological_process
GO:0030030 IEA cell projection organization
GO:0036064 ISS ciliary basal body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296484 POC1A-001 protein_coding Homo_sapiens 0 1267
ENST00000394970 POC1A-002 protein_coding Homo_sapiens 0 1445
ENST00000474012 POC1A-003 protein_coding Homo_sapiens 0 1249

Loading