C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, gamma subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000005284 CACNG3-001 ENSG00000006116 9606 + 16:24255553-24362801 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverTestisENST00000005284
Transcript ID Bladder Brain Heart Liver Testis
ENST00000005284 0.019±0.00 13.771±2.46 0.006±0.00 0.041±0.00 0.160±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VA CIL_0003VA_0002 CGP 16:23836001-24362801
CIL_0003VB CIL_0003VB_0002 CGP 16:24255553-24572863

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 NAS voltage-gated calcium channel activity
GO:0005886 TAS plasma membrane
GO:0005891 NAS voltage-gated calcium channel complex
GO:0006816 NAS calcium ion transport
GO:0007268 TAS synaptic transmission
GO:0016021 IEA integral component of membrane
GO:0030666 TAS endocytic vesicle membrane
GO:0032281 ISS alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0070588 IEA calcium ion transmembrane transport
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084615 Cacng3-001 protein_coding Mus_musculus 0 2322
ENSMUST00000182563 Cacng3-002 protein_coding Mus_musculus 0 911
ENSMUST00000182095 Cacng3-003 protein_coding Mus_musculus 0 763

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