C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: granulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000053867 GRN-001 ENSG00000030582 9606 + 17:44345280-44353102 protein_coding

Homo sapiens EnsemblGRCh38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000053867
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000053867 142.373±0.00 109.472±0.00 9.698±8.03 70.716±60.15 36.744±27.96 25.026±22.10 33.479±25.75 23.732±16.28 84.174±64.90 15.303±12.42 79.312±54.19 284.864±161.67 38.243±32.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005J8 CIL_0005J8_0001 CGP 17:44319625-44353102
CIL_0005J7 CIL_0005J7_0001 CGP 17:44345246-44363875

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001835 IEA blastocyst hatching
GO:0005125 IEA cytokine activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005739 IEA mitochondrion
GO:0007165 NAS signal transduction
GO:0007566 IEA embryo implantation
GO:0008083 TAS growth factor activity
GO:0008219 IEA cell death
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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