C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 1 receptor accessory protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000072516 IL1RAP-001 ENSG00000196083 9606 + 3:190514051-190651519 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungOvaryPlacentaTestisENST00000072516
Transcript ID Adipose Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000072516 0.709±0.00 0.696±0.00 0.503±0.00 0.870±0.00 0.434±0.00 1.928±0.00 3.057±2.11 3.363±0.07 0.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DL CIL_0000DL_0001 CGP 3:190428655-190659750
CIL_0000DM CIL_0000DM_0001 CGP 3:190514051-190892429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006954 TAS inflammatory response
GO:0006955 TAS immune response
GO:0007165 IEA signal transduction
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023156 Il1rap-004 protein_coding Mus_musculus 0 1962
ENSMUST00000096129 Il1rap-001 protein_coding Mus_musculus 0 1459
ENSMUST00000174171 Il1rap-006 nonsense_mediated_decay Mus_musculus 0 887

Loading