C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interleukin 1 receptor accessory protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196083 IL1RAP 9606 + 3:190514051-190659750 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000072516 IL1RAP-001 190514051-190651519 protein_coding
  ENST00000317757 IL1RAP-006 190514102-190659750 protein_coding
  ENST00000342550 IL1RAP-009 190514102-190651512 nonsense_mediated_decay
  ENST00000412080 IL1RAP-017 190615308-190629732 protein_coding
  ENST00000412504 IL1RAP-201 190563941-190651518 protein_coding
  ENST00000413869 IL1RAP-004 190514102-190651512 nonsense_mediated_decay
  ENST00000422485 IL1RAP-003 190514098-190630285 protein_coding
  ENST00000422625 IL1RAP-010 190514087-190604402 protein_coding
  ENST00000422940 IL1RAP-008 190514102-190630285 protein_coding
  ENST00000434491 IL1RAP-007 190514102-190630244 protein_coding
  ENST00000439062 IL1RAP-002 190514059-190648823 protein_coding
  ENST00000443369 IL1RAP-202 190564183-190657196 protein_coding
  ENST00000447382 IL1RAP-005 190514059-190651512 protein_coding
  ENST00000453359 IL1RAP-016 190563446-190609079 protein_coding
  ENST00000461629 IL1RAP-012 190514108-190564517 retained_intron
  ENST00000465496 IL1RAP-011 190514096-190519030 processed_transcript
  ENST00000473566 IL1RAP-013 190514119-190564668 retained_intron
  ENST00000476929 IL1RAP-014 190516219-190520560 processed_transcript
  ENST00000482913 IL1RAP-015 190555864-190564418 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000072516ENST00000342550ENST00000412080ENST00000412504ENST00000413869ENST00000422940ENST00000434491ENST00000439062ENST00000443369ENST00000447382ENST00000453359ENST00000465496ENST00000476929
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000072516 0.709±0.00 N/A N/A 0.696±0.00 0.503±0.00 0.870±0.00 0.434±0.00 N/A N/A 1.928±0.00 N/A 3.057±2.11 3.363±0.07 0.296±0.00
ENST00000342550 N/A N/A 0.584±0.00 N/A N/A 0.290±0.00 N/A 0.172±0.00 N/A N/A 0.170±0.00 N/A N/A N/A
ENST00000412080 N/A N/A N/A N/A N/A N/A 0.933±0.00 19.980±0.00 N/A N/A N/A 10.347±0.00 24.765±0.00 0.378±0.00
ENST00000412504 N/A N/A N/A N/A N/A N/A N/A 2.962±0.00 0.236±0.00 N/A N/A N/A N/A N/A
ENST00000413869 N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A N/A N/A N/A N/A N/A
ENST00000422940 N/A N/A N/A N/A N/A N/A N/A 5.319±0.00 2.382±2.00 1.420±0.00 0.074±0.00 N/A 4.284±1.36 N/A
ENST00000434491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000439062 N/A N/A N/A N/A N/A 0.612±0.00 N/A N/A 0.409±0.00 0.934±0.00 N/A 5.824±0.00 N/A N/A
ENST00000443369 N/A N/A N/A 1.407±0.55 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447382 0.740±0.00 0.747±0.00 N/A 1.295±0.00 0.360±0.00 0.224±0.00 0.524±0.00 N/A 2.658±0.00 2.451±0.00 N/A 2.787±3.13 6.016±1.80 0.740±0.00
ENST00000453359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.803±0.00 N/A N/A N/A
ENST00000465496 N/A N/A N/A N/A 1.459±0.00 N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A
ENST00000476929 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 0.151±0.00 N/A 0.149±0.00 1.088±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DL CIL_0000DL_0001 CGP 3:190428655-190659750
CIL_0000DM CIL_0000DM_0001 CGP 3:190514051-190892429

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0004908 IEA interleukin-1 receptor activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006954 TAS inflammatory response
GO:0006955 TAS immune response
GO:0007165 IEA signal transduction
GO:0016020 IDA membrane
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0042094 IEA interleukin-2 biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091088 CABZ01068246.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000022514 Il1rap interleukin 1 receptor accessory protein protein_coding Mus_musculus

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