C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075693 Yipf1-001 ENSMUSG00000057375 10090 + 4:107314363-107359822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075693 26.594±2.77 12.874±5.39 24.285±3.99 11.834±3.42 17.737±1.07 61.888±5.40 9.451±0.85 27.517±2.05 15.819±5.18 19.419±4.89 3.829±0.57 23.105±9.44 14.827±6.14 14.441±6.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030133 IEA transport vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000072644 YIPF1-201 protein_coding Homo_sapiens 0 917
ENST00000371399 YIPF1-002 protein_coding Homo_sapiens 0 865
ENST00000412288 YIPF1-003 protein_coding Homo_sapiens 0 628
ENST00000464950 YIPF1-001 nonsense_mediated_decay Homo_sapiens 0 918
ENST00000465897 YIPF1-006 processed_transcript Homo_sapiens 0 497
ENST00000469457 YIPF1-004 processed_transcript Homo_sapiens 0 749
ENST00000480151 YIPF1-005 processed_transcript Homo_sapiens 0 778

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