C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase domain 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000200557 ADAM11-001 ENSG00000073670 9606 + 17:44759031-44781846 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLungOvaryPlacentaTestisENST00000200557
Transcript ID Adipose Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000200557 0.067±0.00 4.185±1.78 0.652±0.00 0.622±0.35 0.175±0.00 0.164±0.00 0.382±0.00 0.109±0.00 0.488±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0003CR CIL_0003CR_0001 CGP 17:44759031-44830816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005178 TAS integrin binding
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006508 IEA proteolysis
GO:0007229 TAS integrin-mediated signaling pathway
GO:0008237 TAS metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0031012 ISS extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103081 Adam11-001 protein_coding Mus_musculus 0 3223
ENSMUST00000068150 Adam11-002 protein_coding Mus_musculus 0 2944
ENSMUST00000126024 Adam11-006 processed_transcript Mus_musculus 0 726
ENSMUST00000135513 Adam11-009 processed_transcript Mus_musculus 0 669
ENSMUST00000141563 Adam11-004 processed_transcript Mus_musculus 0 484
ENSMUST00000124879 Adam11-003 processed_transcript Mus_musculus 0 464
ENSMUST00000142912 Adam11-005 processed_transcript Mus_musculus 0 374

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