C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003CR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073670-ENSG00000182963 CGP 9606 17:44759031-44830816
GeneTranscriptPositionBiotype
ENSG00000073670 (ADAM11)
ADAM metallopeptidase domain 11 		ENST00000200557 (ADAM11-001) 44759031-44781846 protein_coding
ENST00000355638 (ADAM11-002) 44759179-44781647 nonsense_mediated_decay
ENST00000535346 (ADAM11-004) 44759325-44779875 protein_coding
ENST00000587773 (ADAM11-005) 44769986-44780610 nonsense_mediated_decay
ENST00000588363 (ADAM11-006) 44775558-44777802 retained_intron
ENSG00000182963 (GJC1)
gap junction protein, gamma 1, 45kDa 		ENST00000330514 (GJC1-003) 44803034-44807884 protein_coding
ENST00000426548 (GJC1-201) 44798448-44830811 protein_coding
ENST00000586267 (GJC1-005) 44805608-44829694 protein_coding
ENST00000586347 (GJC1-008) 44803949-44804966 protein_coding
ENST00000587113 (GJC1-009) 44798448-44805409 protein_coding
ENST00000587239 (GJC1-007) 44805600-44813305 protein_coding
ENST00000590758 (GJC1-001) 44804217-44830813 protein_coding
ENST00000591424 (GJC1-004) 44805507-44830816 protein_coding
ENST00000592524 (GJC1-002) 44804247-44830231 protein_coding
ENSG00000267405 (CTC-296K1.4)
 ENST00000591137 (CTC-296K1.4-001) 44794747-44797783 lincRNA
ENSG00000267505 (CTC-296K1.3)
 ENST00000585620 (CTC-296K1.3-001) 44793199-44794474 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003CR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020926-ENSMUSG00000034520 CGP 10090 11:102761439-102819700
GeneTranscriptPositionBiotype
ENSMUSG00000020926 (Adam11)
a disintegrin and metallopeptidase domain 11 		ENSMUST00000068150 (Adam11-002) 102761439-102780262 protein_coding
ENSMUST00000103081 (Adam11-001) 102761439-102780262 protein_coding
ENSMUST00000124879 (Adam11-003) 102762089-102771474 processed_transcript
ENSMUST00000126024 (Adam11-006) 102771482-102773661 processed_transcript
ENSMUST00000134296 (Adam11-007) 102774081-102776124 processed_transcript
ENSMUST00000135513 (Adam11-009) 102776554-102778467 processed_transcript
ENSMUST00000141563 (Adam11-004) 102762186-102771834 processed_transcript
ENSMUST00000142912 (Adam11-005) 102769767-102771767 processed_transcript
ENSMUST00000143269 (Adam11-008) 102774117-102776401 processed_transcript
ENSMUSG00000034520 (Gjc1)
gap junction protein, gamma 1 		ENSMUST00000068933 (Gjc1-001) 102799579-102819179 protein_coding
ENSMUST00000092567 (Gjc1-004) 102799579-102819700 protein_coding
ENSMUST00000107075 (Gjc1-002) 102799579-102804901 protein_coding
ENSMUST00000131164 (Gjc1-005) 102801176-102819210 processed_transcript
ENSMUST00000155089 (Gjc1-003) 102800731-102805788 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CR_0001ENSG00000073670ENST00000200557ENST00000355638ENST00000535346ENST00000587773ENST00000588363ENSG00000182963ENST00000330514ENST00000426548ENST00000586267ENST00000586347ENST00000587113ENST00000587239ENST00000590758ENST00000591424ENST00000592524ENSG00000267405ENST00000591137ENSG00000267505ENST00000585620CIL_0003CR_0002ENSMUSG00000020926ENSMUST00000068150ENSMUST00000103081ENSMUST00000124879ENSMUST00000126024ENSMUST00000134296ENSMUST00000135513ENSMUST00000141563ENSMUST00000142912ENSMUST00000143269ENSMUSG00000034520ENSMUST00000068933ENSMUST00000092567ENSMUST00000107075ENSMUST00000131164ENSMUST00000155089
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CR_0001ENSG00000073670ENST00000200557ENST00000355638ENST00000535346ENST00000587773ENST00000588363ENSG00000182963ENST00000330514ENST00000426548ENST00000586267ENST00000586347ENST00000587113ENST00000590758ENST00000592524ENSG00000267405ENST00000591137ENSG00000267505ENST00000585620CIL_0003CR_0002ENSMUSG00000020926ENSMUST00000068150ENSMUST00000103081ENSMUST00000126024ENSMUST00000135513ENSMUST00000143269ENSMUSG00000034520ENSMUST00000068933ENSMUST00000092567ENSMUST00000107075ENSMUST00000155089
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073670 ENST00000200557 0.067±0.00 N/A N/A 4.185±1.78 N/A 0.652±0.00 0.622±0.35 0.175±0.00 N/A 0.164±0.00 N/A 0.382±0.00 0.109±0.00 0.488±0.00
ENST00000355638 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A 0.147±0.00 0.079±0.03 0.362±0.19
ENST00000535346 N/A N/A N/A N/A N/A N/A 1.308±0.00 N/A 0.030±0.02 N/A N/A N/A N/A 0.357±0.00
ENST00000587773 N/A 0.198±0.00 N/A 2.927±0.00 0.129±0.00 N/A 0.415±0.25 N/A 0.104±0.06 N/A 0.058±0.00 0.066±0.00 0.028±0.00 0.846±0.66
ENST00000588363 N/A N/A N/A N/A N/A 0.921±0.00 N/A 0.283±0.00 0.354±0.00 N/A N/A N/A 0.116±0.00 1.760±0.00
ENSG00000182963 ENST00000330514 N/A N/A N/A 0.573±0.00 N/A 1.625±0.00 N/A N/A N/A 0.818±0.00 N/A 0.353±0.00 N/A N/A
ENST00000426548 1.583±0.00 N/A N/A 0.338±0.00 N/A 1.139±0.00 0.586±0.00 N/A N/A N/A N/A 0.673±0.19 3.105±0.60 1.439±0.00
ENST00000586267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.881±0.00
ENST00000586347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.209±0.00 N/A N/A N/A
ENST00000587113 N/A 1.857±0.00 N/A N/A 1.872±0.00 3.985±0.00 1.794±0.00 0.241±0.12 N/A 1.910±0.00 N/A 0.677±0.15 2.303±0.46 2.220±0.00
ENST00000587239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590758 N/A N/A 0.787±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592524 N/A N/A N/A N/A 1.800±0.00 N/A N/A N/A 4.089±0.00 0.720±0.00 N/A N/A N/A 3.257±0.30
ENSG00000267405 ENST00000591137 0.072±0.00 3.999±0.00 N/A N/A 0.398±0.21 0.249±0.17 0.822±0.00 0.048±0.00 8.042±0.00 0.700±0.00 N/A 0.200±0.12 0.949±0.53 0.782±0.69
ENSG00000267505 ENST00000585620 0.111±0.00 1.799±0.00 N/A 0.554±0.00 0.332±0.00 0.910±0.00 1.196±0.00 N/A N/A 0.867±0.47 0.131±0.00 0.307±0.07 0.704±0.44 0.867±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020926 ENSMUST00000068150 0.792±0.54 0.732±0.27 2.662±0.10 5.074±0.00 0.648±0.21 1.547±1.09 1.819±0.68 0.342±0.08 0.311±0.27 0.196±0.07 0.141±0.05 0.540±0.15 0.054±0.03 2.025±1.08
ENSMUST00000103081 N/A N/A N/A 7.969±2.33 N/A N/A N/A N/A 0.042±0.00 0.174±0.00 0.154±0.00 N/A 0.062±0.04 0.089±0.00
ENSMUST00000124879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126024 N/A N/A N/A N/A 0.654±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135513 N/A N/A N/A N/A 0.688±0.00 N/A N/A N/A N/A N/A 0.495±0.00 N/A 0.603±0.00 N/A
ENSMUST00000141563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143269 N/A N/A N/A 94.149±0.00 N/A N/A N/A N/A N/A N/A N/A 1.878±0.00 0.686±0.29 9.616±0.00
ENSMUSG00000034520 ENSMUST00000068933 6.385±1.47 1.814±0.95 9.014±0.18 8.320±5.54 2.244±1.43 2.504±0.45 5.598±2.13 1.425±0.82 0.599±0.30 4.857±1.28 1.103±0.43 3.695±1.24 2.178±0.73 2.474±1.15
ENSMUST00000092567 4.574±0.89 0.531±0.09 2.408±0.00 0.713±0.00 1.689±0.72 1.515±0.66 1.847±0.18 1.359±0.54 0.229±0.22 2.285±0.61 0.447±0.07 2.937±1.76 2.370±1.54 1.511±0.22
ENSMUST00000107075 2.314±0.00 0.771±0.39 N/A 3.231±0.74 0.560±0.19 0.714±0.10 N/A 0.350±0.00 0.242±0.10 1.344±0.32 0.229±0.00 1.858±0.98 N/A 0.921±0.05
ENSMUST00000131164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155089 N/A 0.300±0.07 N/A N/A 0.371±0.00 N/A 0.683±0.00 0.290±0.00 0.055±0.02 1.116±0.13 N/A 0.962±0.20 0.658±0.08 N/A

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