C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 13B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000202556 PPP1R13B-001 ENSG00000088808 9606 - 14:103733752-103847590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000202556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000202556 2.320±0.00 3.241±0.00 0.576±0.00 2.532±1.53 2.102±0.00 3.251±0.00 10.732±8.16 2.244±1.56 0.771±0.44 4.053±1.73 5.315±0.00 5.220±5.74 3.301±1.64 16.535±1.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X2 CIL_0006X2_0001 CGP 14:103715730-103847590
CIL_00019A CIL_00019A_0001 CGP 14:103733752-103928269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006915 IEA apoptotic process
GO:0008134 IEA transcription factor binding
GO:0045786 IEA:TAS negative regulation of cell cycle
GO:0072332 IDA intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054815 Ppp1r13b-201 protein_coding Mus_musculus 0 3613
ENSMUST00000163747 Ppp1r13b-202 protein_coding Mus_musculus 0 350

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