C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000207157 TBX15-001 ENSG00000092607 9606 - 1:118883046-118989556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000207157
Transcript ID Brain Ovary Testis
ENST00000207157 0.219±0.07 0.090±0.05 0.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CA CIL_0008CA_0001 VISTA 1:118609935-119210971
CIL_0008QB CIL_0008QB_0001 VISTA 1:118677867-119281745
CIL_0007RV CIL_0007RV_0001 VISTA 1:118706148-119314384
CIL_00012O CIL_00012O_0002 CGP 1:118883046-119140671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0001106 IEA RNA polymerase II transcription corepressor activity
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0042803 IEA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity
GO:0048701 IEA embryonic cranial skeleton morphogenesis
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0070722 IEA Tle3-Aes complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029462 Tbx15-001 protein_coding Mus_musculus 0 2966
ENSMUST00000150756 Tbx15-003 processed_transcript Mus_musculus 0 787
ENSMUST00000151606 Tbx15-002 processed_transcript Mus_musculus 0 394
ENSDART00000103448 tbx18-001 protein_coding Danio_rerio 0 292
ENSDART00000126206 tbx18-201 protein_coding Danio_rerio 0 285

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