C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029462 Tbx15-001 ENSMUSG00000027868 10090 + 3:99253760-99354259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000029462
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000029462 0.026±0.00 0.096±0.05 0.545±0.32 9.047±4.78 0.040±0.02 0.060±0.00 0.187±0.16 0.044±0.07 0.923±0.87 56.390±4.30 0.078±0.04 0.076±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RV CIL_0007RV_0002 VISTA 3:98932927-99536556
CIL_0008QB CIL_0008QB_0002 VISTA 3:98959779-99563564
CIL_0008CA CIL_0008CA_0002 VISTA 3:99030606-99631569

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000976 IDA transcription regulatory region sequence-specific DNA binding
GO:0001106 IDA RNA polymerase II transcription corepressor activity
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IDA protein homodimerization activity
GO:0046982 IDA protein heterodimerization activity
GO:0048701 IMP embryonic cranial skeleton morphogenesis
GO:0048704 IGI embryonic skeletal system morphogenesis
GO:0070722 IDA Tle3-Aes complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000037681 tbx5a-201 protein_coding Danio_rerio 0.0000000002 73
ENSDART00000037691 tbx5a-001 protein_coding Danio_rerio 0.0000000002 73
ENST00000207157 TBX15-001 protein_coding Homo_sapiens 0 2966
ENST00000369429 TBX15-002 protein_coding Homo_sapiens 0 3295
ENST00000449873 TBX15-003 protein_coding Homo_sapiens 0 1786

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