C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000211287 MAPK13-001 ENSG00000156711 9606 + 6:36130321-36140065 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000211287
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000211287 2.640±0.00 7.857±0.00 1.907±0.03 1.807±1.00 0.241±0.00 3.387±3.33 0.445±0.13 4.608±3.90 21.464±25.65 11.300±1.35 33.233±11.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O5 CIL_0002O5_0001 CGP 6:36027677-36144524
CIL_0002O6 CIL_0002O6_0001 CGP 6:36127809-36232790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000165 IEA MAPK cascade
GO:0004672 IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004707 IDA MAP kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0006950 IDA response to stress
GO:0006970 IDA response to osmotic stress
GO:0007049 IEA cell cycle
GO:0007265 TAS Ras protein signal transduction
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0032755 IMP positive regulation of interleukin-6 production
GO:0035556 IDA intracellular signal transduction
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050729 IC positive regulation of inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004986 Mapk13-001 protein_coding Mus_musculus 0 1325
ENSMUST00000129096 Mapk13-002 nonsense_mediated_decay Mus_musculus 0 789
ENSMUST00000124099 Mapk13-003 retained_intron Mus_musculus 0 643
ENSMUST00000088827 Mapk12-201 protein_coding Mus_musculus 0 346
ENSMUST00000133786 Mapk13-004 retained_intron Mus_musculus 0 316
ENSMUST00000088823 Mapk11-201 protein_coding Mus_musculus 2.00386e-43 182

Loading