C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000215555 MARCH2-201 ENSG00000099785 9606 + 19:8413303-8439011 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215555
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215555 36.944±0.00 20.723±0.00 28.154±22.38 37.013±33.45 26.853±25.45 22.199±18.29 13.152±0.00 9.040±7.57 14.697±13.81 20.344±15.65 10.755±5.62 22.809±9.41 13.456±10.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NQ CIL_0002NQ_0001 CGP 19:7926718-8445041
CIL_0000UT CIL_0000UT_0001 CGP 19:7958579-8445041
CIL_0005GY CIL_0005GY_0002 CGP 19:8413270-8489114

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0005783 IDA endoplasmic reticulum
GO:0006897 IEA endocytosis
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IDA cytoplasmic vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172767 March2-004 protein_coding Mus_musculus 0 1050
ENSMUST00000186022 March2-201 protein_coding Mus_musculus 0 885
ENSMUST00000167611 March2-002 nonsense_mediated_decay Mus_musculus 0 885
ENSMUST00000066121 March2-001 protein_coding Mus_musculus 0 885
ENSMUST00000172934 March2-003 nonsense_mediated_decay Mus_musculus 0 821
ENSMUST00000173329 March2-005 protein_coding Mus_musculus 0 809
ENSMUST00000173015 March2-006 protein_coding Mus_musculus 0 793
ENSMUST00000174040 March2-008 protein_coding Mus_musculus 0 691
ENSMUST00000173454 March2-007 protein_coding Mus_musculus 0 460

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