C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyridoxal (pyridoxine, vitamin B6) phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000215904 PDXP-001 ENSG00000241360 9606 + 22:37658727-37666934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215904 2.470±0.00 4.445±0.00 0.091±0.00 43.574±33.47 3.163±0.00 9.754±0.00 10.742±0.00 6.569±0.00 34.195±0.00 7.213±0.00 4.646±3.93 10.323±5.13 5.118±0.00 16.782±6.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040D CIL_00040D_0001 CGP 22:37608475-37666932

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004647 IEA phosphoserine phosphatase activity
GO:0004721 IDA phosphoprotein phosphatase activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006470 IDA protein dephosphorylation
GO:0007088 IMP regulation of mitosis
GO:0008152 IEA metabolic process
GO:0015629 IDA actin cytoskeleton
GO:0016791 IEA phosphatase activity
GO:0030027 IDA lamellipodium
GO:0030496 IDA midbody
GO:0030836 IMP positive regulation of actin filament depolymerization
GO:0031072 IDA heat shock protein binding
GO:0031247 IDA actin rod assembly
GO:0032154 IDA cleavage furrow
GO:0032361 ISS pyridoxal phosphate catabolic process
GO:0032465 IMP regulation of cytokinesis
GO:0032587 IDA ruffle membrane
GO:0033883 ISS pyridoxal phosphatase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070938 IDA contractile ring
GO:0071318 IDA cellular response to ATP

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089378 Sh3bp1-201 protein_coding Mus_musculus 0 1125
ENSMUST00000134703 Sh3bp1-007 processed_transcript Mus_musculus 0 399

Loading