C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222462 WNT16-001 ENSG00000002745 9606 + 7:121329003-121341104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000222462
Transcript ID Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000222462 0.091±0.00 0.147±0.00 0.028±0.01 0.072±0.01 0.011±0.00 0.011±0.00 0.028±0.02 0.371±0.36 0.135±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XW CIL_0004XW_0002 CGP 7:120988677-121341104
CIL_0003R0 CIL_0003R0_0001 CGP 7:121325367-121396364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003408 ISS optic cup formation involved in camera-type eye development
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0010628 IMP positive regulation of gene expression
GO:0014068 IMP positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016055 IBA:IEA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0030216 IMP keratinocyte differentiation
GO:0043616 IMP keratinocyte proliferation
GO:0045165 IBA cell fate commitment
GO:0046330 IMP positive regulation of JNK cascade
GO:0046849 IEA bone remodeling
GO:0060317 IEA cardiac epithelial to mesenchymal transition
GO:0060548 IMP negative regulation of cell death
GO:0090399 IMP replicative senescence
GO:0090403 IMP oxidative stress-induced premature senescence

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031681 Wnt16-001 protein_coding Mus_musculus 0 1406
ENSMUST00000128245 Wnt16-002 protein_coding Mus_musculus 0 808
ENSMUST00000148639 Wnt16-003 protein_coding Mus_musculus 0 791
ENSMUST00000176681 Wnt16-004 protein_coding Mus_musculus 2e-40 172

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