C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003R0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000002745-ENSG00000196937 CGP 9606 7:121325367-121396364
GeneTranscriptPositionBiotype
ENSG00000002745 (WNT16)
wingless-type MMTV integration site family, member 16 		ENST00000222462 (WNT16-001) 121329003-121341104 protein_coding
ENST00000361301 (WNT16-002) 121325367-121339458 protein_coding
ENSG00000196937 (FAM3C)
family with sequence similarity 3, member C 		ENST00000359943 (FAM3C-001) 121348851-121396334 protein_coding
ENST00000412653 (FAM3C-002) 121360056-121396364 protein_coding
ENST00000426156 (FAM3C-004) 121360092-121396308 protein_coding
ENST00000474082 (FAM3C-006) 121350383-121351541 retained_intron
ENST00000497622 (FAM3C-005) 121362705-121364552 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0003R0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029671-ENSMUSG00000029672 CGP 10090 6:22288227-22356243
GeneTranscriptPositionBiotype
ENSMUSG00000029671 (Wnt16)
wingless-type MMTV integration site family, member 16 		ENSMUST00000031681 (Wnt16-001) 22288230-22298522 protein_coding
ENSMUST00000128245 (Wnt16-002) 22288227-22293579 protein_coding
ENSMUST00000148639 (Wnt16-003) 22288288-22294585 protein_coding
ENSMUST00000176681 (Wnt16-004) 22288861-22297827 protein_coding
ENSMUSG00000029672 (Fam3c)
family with sequence similarity 3, member C 		ENSMUST00000081288 (Fam3c-002) 22307882-22356243 protein_coding
ENSMUST00000163371 (Fam3c-006) 22309327-22356073 nonsense_mediated_decay
ENSMUST00000163963 (Fam3c-003) 22307882-22356098 protein_coding
ENSMUST00000164669 (Fam3c-005) 22308460-22329456 protein_coding
ENSMUST00000165576 (Fam3c-001) 22306520-22356166 protein_coding
ENSMUST00000168965 (Fam3c-004) 22322290-22343913 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003R0_0001ENSG00000002745ENST00000222462ENST00000361301ENSG00000196937ENST00000359943ENST00000412653ENST00000426156ENST00000474082ENST00000497622CIL_0003R0_0002ENSMUSG00000029671ENSMUST00000031681ENSMUST00000128245ENSMUST00000148639ENSMUST00000176681ENSMUSG00000029672ENSMUST00000081288ENSMUST00000163371ENSMUST00000163963ENSMUST00000164669ENSMUST00000165576ENSMUST00000168965
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003R0_0001ENSG00000002745ENST00000222462ENST00000361301ENSG00000196937ENST00000359943ENST00000412653CIL_0003R0_0002ENSMUSG00000029671ENSMUST00000031681ENSMUST00000128245ENSMUST00000148639ENSMUSG00000029672ENSMUST00000081288ENSMUST00000163963ENSMUST00000164669ENSMUST00000165576ENSMUST00000168965
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000002745 ENST00000222462 N/A 0.091±0.00 N/A 0.147±0.00 0.028±0.01 0.072±0.01 N/A 0.011±0.00 0.011±0.00 N/A N/A 0.028±0.02 0.371±0.36 0.135±0.12
ENST00000361301 N/A N/A N/A N/A N/A 0.213±0.00 0.018±0.00 0.165±0.00 N/A N/A 0.035±0.00 0.063±0.03 0.359±0.24 0.123±0.07
ENSG00000196937 ENST00000359943 5.196±0.00 11.337±0.00 2.398±0.00 16.771±10.80 3.479±1.33 8.959±6.50 4.085±0.00 6.587±5.84 5.866±0.07 9.842±7.88 0.714±0.18 10.276±4.96 16.611±3.18 11.974±6.05
ENST00000412653 N/A N/A 9.280±0.00 N/A N/A N/A N/A N/A 7.674±0.00 N/A N/A N/A N/A N/A
ENST00000426156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029671 ENSMUST00000031681 7.693±0.59 0.103±0.00 0.032±0.01 0.270±0.22 0.461±0.08 0.165±0.07 0.207±0.04 0.694±0.11 0.026±0.01 0.285±0.14 0.345±0.16 7.909±1.90 0.259±0.16 0.031±0.01
ENSMUST00000128245 0.022±0.00 N/A 0.013±0.00 0.034±0.01 N/A 0.177±0.00 0.021±0.01 N/A 0.003±0.00 N/A 0.013±0.00 N/A 0.014±0.00 0.011±0.00
ENSMUST00000148639 0.463±0.59 0.168±0.09 N/A 0.065±0.01 0.774±0.40 0.190±0.12 N/A N/A 0.008±0.00 0.075±0.04 N/A 5.319±2.69 0.096±0.05 0.049±0.01
ENSMUST00000176681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029672 ENSMUST00000081288 0.601±0.00 N/A 6.426±0.28 9.530±10.62 3.314±0.00 N/A 2.007±0.00 0.719±0.00 4.441±1.83 N/A 1.852±0.37 26.259±10.81 15.107±7.88 3.737±3.15
ENSMUST00000163371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163963 1.871±0.00 N/A N/A N/A 1.504±0.06 N/A N/A 0.459±0.03 N/A N/A N/A N/A N/A 0.955±0.00
ENSMUST00000164669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.630±0.00
ENSMUST00000165576 3.349±1.38 5.388±1.81 8.477±1.37 3.981±0.79 1.803±0.85 1.333±0.39 2.126±0.54 2.982±0.85 2.919±0.98 8.694±1.22 1.202±0.17 5.702±2.71 4.785±1.97 1.786±0.80
ENSMUST00000168965 N/A N/A N/A N/A N/A N/A N/A N/A 1.376±0.00 N/A N/A N/A N/A N/A

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