C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222990 SNX8-001 ENSG00000106266 9606 - 7:2251770-2314464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222990
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222990 5.932±0.00 7.840±0.00 3.494±3.05 4.771±0.00 1.731±1.22 1.465±1.27 6.380±0.00 2.435±2.29 0.515±0.16 4.887±0.00 5.787±2.84 5.679±1.91 4.559±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZO CIL_0000ZO_0001 CGP 7:2242222-2354318
CIL_0000ZL CIL_0000ZL_0001 CGP 7:2251770-2380745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006886 IEA:IMP intracellular protein transport
GO:0030904 IDA retromer complex
GO:0031901 IEA:IDA early endosome membrane
GO:0034498 IEA:IMP early endosome to Golgi transport
GO:0035091 IEA:IMP phosphatidylinositol binding
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031539 Snx8-201 protein_coding Mus_musculus 0 1441

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