C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000223122 C1GALT1-001 ENSG00000106392 9606 + 7:7234258-7248651 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223122
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223122 1.942±0.00 3.006±0.00 4.312±0.00 3.222±0.00 0.685±0.00 1.576±0.90 0.862±0.65 2.500±0.00 0.508±0.00 4.695±0.00 3.633±0.00 0.386±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001525 IMP angiogenesis
GO:0001822 IMP kidney development
GO:0005515 IPI protein binding
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0016263 IEA:IDA glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016266 IEA:TAS O-glycan processing
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030154 IEA cell differentiation
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040159 C1galt1-001 protein_coding Mus_musculus 0 1517

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