C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 4 homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000230732 POU4F3-001 ENSG00000091010 9606 + 5:146339024-146340520 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J0 CIL_0001J0_0002 CGP 5:146113038-146339251
CIL_0001J5 CIL_0001J5_0002 CGP 5:146203600-146340520
CIL_0001AK CIL_0001AK_0001 CGP 5:146339024-146511961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 TAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007601 TAS visual perception
GO:0007605 IEA sensory perception of sound
GO:0021562 IEA vestibulocochlear nerve development
GO:0031290 IEA retinal ganglion cell axon guidance
GO:0042472 IEA inner ear morphogenesis
GO:0042491 IEA auditory receptor cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048675 IEA axon extension
GO:0048839 IEA inner ear development
GO:0050885 IEA neuromuscular process controlling balance
GO:0051402 IEA neuron apoptotic process
GO:0060113 IEA inner ear receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025374 Pou4f3-001 protein_coding Mus_musculus 0 1522
ENSDART00000149175 pou4f3-001 protein_coding Danio_rerio 0 553
ENSMUST00000053016 Pou4f1-001 protein_coding Mus_musculus 0 492
ENSMUST00000034115 Pou4f2-001 protein_coding Mus_musculus 0 459

Loading