C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032109 Ino80b-201 ENSMUSG00000030034 10090 - 6:83121828-83125029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032109 5.238±1.45 8.072±0.00 6.060±0.79 10.923±2.81 6.869±5.32 5.550±1.89 0.948±0.32 3.776±1.81 5.294±2.71 9.600±2.98 2.385±0.56 16.290±6.46 4.672±2.50 9.996±2.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IEA Ino80 complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233331 INO80B-001 protein_coding Homo_sapiens 0 1003
ENST00000409493 INO80B-010 protein_coding Homo_sapiens 0 599
ENST00000409917 INO80B-006 protein_coding Homo_sapiens 0 566
ENST00000431187 INO80B-007 protein_coding Homo_sapiens 0 363
ENST00000441673 INO80B-WBP1-002 nonsense_mediated_decay Homo_sapiens 0 752
ENST00000452361 INO80B-WBP1-001 nonsense_mediated_decay Homo_sapiens 0 1005
ENST00000455562 INO80B-012 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000469849 INO80B-011 processed_transcript Homo_sapiens 0 636
ENST00000471577 INO80B-004 retained_intron Homo_sapiens 0 590
ENST00000473618 INO80B-008 retained_intron Homo_sapiens 0 616
ENST00000494986 INO80B-005 processed_transcript Homo_sapiens 0 551

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