C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000234626 CDC7-001 ENSG00000097046 9606 + 1:91500893-91525764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000234626
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000234626 0.070±0.00 0.022±0.00 0.676±0.00 0.613±0.00 0.034±0.00 0.923±0.00 0.104±0.01 0.663±0.00 1.438±0.28 1.368±0.47 3.299±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069J CIL_00069J_0001 CGP 1:91260766-91525764
CIL_00069I CIL_00069I_0001 CGP 1:91500893-91906335

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0004672 IEA:IMP protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006260 TAS DNA replication
GO:0006468 IEA protein phosphorylation
GO:0008284 IMP positive regulation of cell proliferation
GO:0010571 IMP positive regulation of nuclear cell cycle DNA replication
GO:0010971 IMP positive regulation of G2/M transition of mitotic cell cycle
GO:0015630 IDA microtubule cytoskeleton
GO:0016301 IDA kinase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0044770 IMP cell cycle phase transition
GO:0045171 IDA intercellular bridge
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031221 Cdc7-001 protein_coding Mus_musculus 0 1546
ENSMUST00000118261 Cdc7-005 protein_coding Mus_musculus 0 1541
ENSMUST00000140378 Cdc7-004 retained_intron Mus_musculus 0 992
ENSMUST00000129938 Cdc7-006 nonsense_mediated_decay Mus_musculus 0 959
ENSMUST00000076467 Cdc7-003 protein_coding Mus_musculus 0 832
ENSMUST00000117196 Cdc7-002 protein_coding Mus_musculus 0 832

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