C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000235345 SLC35D1-001 ENSG00000116704 9606 - 1:66999332-67054099 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000235345
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000235345 1.585±0.00 1.508±0.00 1.886±0.00 0.573±0.37 2.024±0.11 5.842±4.13 0.828±0.14 7.536±3.56 7.060±5.08 1.175±0.38 1.133±0.34 1.491±0.84 2.369±0.94 2.739±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069G CIL_00069G_0001 CGP 1:66924895-67054099
CIL_00069F CIL_00069F_0001 CGP 1:66999332-67231853

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005461 TAS UDP-glucuronic acid transmembrane transporter activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006065 TAS UDP-glucuronate biosynthetic process
GO:0006805 TAS xenobiotic metabolic process
GO:0008643 IEA carbohydrate transport
GO:0015165 IEA pyrimidine nucleotide-sugar transmembrane transporter activity
GO:0015781 IEA pyrimidine nucleotide-sugar transport
GO:0015787 TAS UDP-glucuronic acid transport
GO:0016021 IEA integral component of membrane
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0048706 IEA embryonic skeletal system development
GO:0052695 TAS cellular glucuronidation
GO:0055085 TAS transmembrane transport
GO:0090481 IEA pyrimidine nucleotide-sugar transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036195 Slc35d1-002 protein_coding Mus_musculus 0 1411
ENSMUST00000150285 Slc35d1-001 protein_coding Mus_musculus 0 1092
ENSMUST00000183432 Slc35d1-003 nonsense_mediated_decay Mus_musculus 0 828
ENSMUST00000094947 Slc35d1-006 protein_coding Mus_musculus 0 684
ENSMUST00000154845 Slc35d1-005 processed_transcript Mus_musculus 0 420
ENSMUST00000033498 Timm17b-001 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000171561 Mms19-001 protein_coding Mus_musculus 0.00000005 66
ENSMUST00000167927 Mms19-006 nonsense_mediated_decay Mus_musculus 0.00000005 66

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