C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116704-ENSG00000203963 CGP 9606 1:66999332-67231853
GeneTranscriptPositionBiotype
ENSG00000116704 (SLC35D1)
solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 		ENST00000235345 (SLC35D1-001) 66999332-67054099 protein_coding
ENSG00000162594 (IL23R)
interleukin 23 receptor 		ENST00000347310 (IL23R-001) 67166400-67259979 protein_coding
ENST00000395227 (IL23R-201) 67219557-67259671 protein_coding
ENST00000425614 (IL23R-003) 67207616-67259248 protein_coding
ENST00000473881 (IL23R-002) 67207638-67259675 processed_transcript
ENSG00000203963 (C1orf141)
chromosome 1 open reading frame 141 		ENST00000371004 (C1orf141-001) 67092395-67134970 retained_intron
ENST00000371006 (C1orf141-201) 67092176-67127261 protein_coding
ENST00000371007 (C1orf141-004) 67092165-67231852 protein_coding
ENST00000448166 (C1orf141-003) 67093559-67231853 protein_coding
ENST00000475209 (C1orf141-202) 67092176-67127261 protein_coding
ENST00000544837 (C1orf141-002) 67092948-67134977 nonsense_mediated_decay
ENST00000603691 (C1orf141-005) 67096296-67134977 protein_coding
ENST00000621590 (C1orf141-203) 67092397-67127261 protein_coding
ENSG00000275678 (RP4-547N15.3)
 ENST00000621423 (RP4-547N15.3-001) 67121605-67123956 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_00069F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028521-ENSMUSG00000028520 CGP 10090 4:103170649-103290863
GeneTranscriptPositionBiotype
ENSMUSG00000028520 (4921539E11Rik)
RIKEN cDNA 4921539E11 gene 		ENSMUST00000030245 (4921539E11Rik-001) 103230445-103290863 protein_coding
ENSMUST00000097944 (4921539E11Rik-002) 103235183-103290863 protein_coding
ENSMUST00000168664 (4921539E11Rik-201) 103230445-103290863 protein_coding
ENSMUSG00000028521 (Slc35d1)
solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 		ENSMUST00000036195 (Slc35d1-002) 103170656-103214803 protein_coding
ENSMUST00000094947 (Slc35d1-006) 103210332-103214799 protein_coding
ENSMUST00000150285 (Slc35d1-001) 103170649-103215164 protein_coding
ENSMUST00000154845 (Slc35d1-005) 103210553-103214672 processed_transcript
ENSMUST00000183432 (Slc35d1-003) 103201161-103214803 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069F_0001ENSG00000116704ENST00000235345ENSG00000162594ENST00000347310ENST00000395227ENST00000425614ENST00000473881ENSG00000203963ENST00000371004ENST00000371006ENST00000371007ENST00000448166ENST00000475209ENST00000544837ENST00000603691ENST00000621590ENSG00000275678ENST00000621423CIL_00069F_0002ENSMUSG00000028520ENSMUST00000030245ENSMUST00000097944ENSMUST00000168664ENSMUSG00000028521ENSMUST00000036195ENSMUST00000094947ENSMUST00000150285ENSMUST00000154845ENSMUST00000183432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069F_0001ENSG00000116704ENST00000235345ENSG00000162594ENST00000347310ENST00000395227ENST00000425614ENSG00000203963ENST00000371004ENST00000371006ENST00000371007ENST00000448166ENST00000475209ENST00000544837ENST00000603691ENSG00000275678ENST00000621423CIL_00069F_0002ENSMUSG00000028520ENSMUST00000030245ENSMUST00000097944ENSMUST00000168664ENSMUSG00000028521ENSMUST00000036195ENSMUST00000150285
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116704 ENST00000235345 1.585±0.00 1.508±0.00 1.886±0.00 0.573±0.37 2.024±0.11 5.842±4.13 0.828±0.14 7.536±3.56 7.060±5.08 1.175±0.38 1.133±0.34 1.491±0.84 2.369±0.94 2.739±0.23
ENSG00000162594 ENST00000347310 0.036±0.00 0.061±0.00 N/A 0.018±0.00 0.007±0.00 0.643±0.00 0.013±0.00 0.029±0.01 0.015±0.00 0.098±0.02 N/A 0.046±0.04 N/A 0.136±0.04
ENST00000395227 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A 0.072±0.06 N/A N/A
ENST00000425614 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.088±0.00 N/A N/A
ENST00000473881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000203963 ENST00000371004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.550±0.00
ENST00000371006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.358±0.00
ENST00000371007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A 2.650±0.00
ENST00000448166 N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475209 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A
ENST00000544837 N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A 0.180±0.15 N/A N/A N/A 1.335±0.85
ENST00000603691 0.057±0.00 0.131±0.00 N/A 0.247±0.00 0.083±0.00 0.013±0.00 0.159±0.00 N/A 0.025±0.00 N/A 0.077±0.00 0.421±0.00 N/A 2.586±1.26
ENST00000621590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275678 ENST00000621423 0.034±0.00 0.211±0.00 N/A 0.060±0.02 0.022±0.00 0.097±0.00 0.016±0.00 0.141±0.00 0.069±0.00 0.546±0.00 0.040±0.00 0.308±0.25 0.013±0.00 1.968±0.84
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028520 ENSMUST00000030245 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A 11.453±3.14
ENSMUST00000097944 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A 0.003±0.00 11.989±0.00
ENSMUST00000168664 N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A 0.010±0.00 0.033±0.02 7.671±6.57
ENSMUSG00000028521 ENSMUST00000036195 1.250±0.20 1.868±0.46 3.185±0.04 1.117±0.56 1.406±0.53 3.739±0.18 1.196±0.34 4.651±1.48 9.250±5.13 1.583±0.21 1.229±0.37 6.608±3.17 5.560±2.31 1.784±0.99
ENSMUST00000094947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150285 0.598±0.21 N/A N/A 0.139±0.00 0.214±0.00 6.329±3.48 0.446±0.00 2.220±0.94 3.981±3.35 0.700±0.00 0.897±0.00 4.650±0.00 0.984±0.03 0.497±0.00
ENSMUST00000154845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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