C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-rich PDZ-binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000238892 CRIPT-001 ENSG00000119878 9606 + 2:46617151-46625742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungOvaryENST00000238892
Transcript ID Bladder Brain Liver Lung Ovary
ENST00000238892 1.781±0.00 4.969±0.42 5.571±0.00 3.402±0.00 3.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ND CIL_0001ND_0001 CGP 2:46541806-46617119
CIL_0001NE CIL_0001NE_0001 CGP 2:46580937-46625742
CIL_0006KQ CIL_0006KQ_0001 CGP 2:46616416-46763129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008017 ISS microtubule binding
GO:0014069 ISS postsynaptic density
GO:0030054 IEA cell junction
GO:0030165 IDA PDZ domain binding
GO:0030425 ISS dendrite
GO:0031122 ISS cytoplasmic microtubule organization
GO:0032403 ISS protein complex binding
GO:0035372 ISS protein localization to microtubule
GO:0043025 ISS neuronal cell body
GO:0043197 ISS dendritic spine
GO:0043198 ISS dendritic shaft
GO:0045184 ISS establishment of protein localization
GO:1902897 ISS regulation of postsynaptic density protein 95 clustering

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024959 Cript-001 protein_coding Mus_musculus 0 451
ENSMUST00000160269 Cript-003 protein_coding Mus_musculus 0 429

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