C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119878-ENSG00000171150 CGP 9606 2:46616416-46763129
GeneTranscriptPositionBiotype
ENSG00000119878 (CRIPT)
cysteine-rich PDZ-binding protein 		ENST00000238892 (CRIPT-001) 46617151-46625742 protein_coding
ENST00000486447 (CRIPT-002) 46616416-46625053 processed_transcript
ENSG00000151665 (PIGF)
phosphatidylinositol glycan anchor biosynthesis, class F 		ENST00000281382 (PIGF-001) 46580937-46617119 protein_coding
ENST00000306465 (PIGF-002) 46581285-46617051 protein_coding
ENST00000412717 (PIGF-004) 46581416-46617055 nonsense_mediated_decay
ENST00000420164 (PIGF-007) 46581285-46612274 nonsense_mediated_decay
ENST00000474980 (PIGF-006) 46615018-46617037 protein_coding
ENST00000482786 (PIGF-005) 46581285-46588622 processed_transcript
ENST00000495933 (PIGF-003) 46612228-46617030 processed_transcript
ENSG00000171150 (SOCS5)
suppressor of cytokine signaling 5 		ENST00000306503 (SOCS5-001) 46698952-46763129 protein_coding
ENST00000394861 (SOCS5-002) 46699187-46762313 protein_coding
ENSG00000279254 (RP11-536C12.1)
 ENST00000622979 (RP11-536C12.1-001) 46668870-46670778 TEC
CIL_0006KQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024146-ENSMUSG00000037104 CGP 10090 17:87025550-87137583
GeneTranscriptPositionBiotype
ENSMUSG00000024146 (Cript)
cysteine-rich PDZ-binding protein 		ENSMUST00000024959 (Cript-001) 87025550-87035810 protein_coding
ENSMUST00000160269 (Cript-003) 87025611-87035472 protein_coding
ENSMUST00000160824 (Cript-002) 87025610-87028242 retained_intron
ENSMUSG00000037104 (Socs5)
suppressor of cytokine signaling 5 		ENSMUST00000041369 (Socs5-201) 87107679-87137583 protein_coding
ENSMUSG00000071035 (Gm5499)
predicted pseudogene 5499 		ENSMUST00000090731 (Gm5499-001) 87078271-87079155 processed_pseudogene
ENSMUSG00000087736 (Gm24648)
predicted gene, 24648 		ENSMUST00000157111 (Gm24648-201) 87053694-87053825 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KQ_0001ENSG00000119878ENST00000238892ENST00000486447ENSG00000151665ENST00000281382ENST00000306465ENST00000412717ENST00000420164ENST00000474980ENST00000482786ENST00000495933ENSG00000171150ENST00000306503ENST00000394861ENSG00000279254ENST00000622979CIL_0006KQ_0002ENSMUSG00000024146ENSMUST00000024959ENSMUST00000160269ENSMUST00000160824ENSMUSG00000037104ENSMUST00000041369ENSMUSG00000071035ENSMUST00000090731ENSMUSG00000087736ENSMUST00000157111
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KQ_0001ENSG00000119878ENST00000238892ENST00000486447ENSG00000151665ENST00000281382ENSG00000171150ENST00000306503ENST00000394861ENSG00000279254ENST00000622979CIL_0006KQ_0002ENSMUSG00000024146ENSMUST00000024959ENSMUST00000160269ENSMUST00000160824ENSMUSG00000037104ENSMUST00000041369ENSMUSG00000071035ENSMUST00000090731ENSMUSG00000087736ENSMUST00000157111
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119878 ENST00000238892 N/A N/A 1.781±0.00 4.969±0.42 N/A N/A N/A N/A 5.571±0.00 3.402±0.00 N/A 3.330±0.00 N/A N/A
ENST00000486447 N/A N/A N/A 7.015±0.00 N/A N/A N/A N/A 4.037±0.00 N/A N/A N/A N/A N/A
ENSG00000151665 ENST00000281382 22.987±0.00 N/A N/A 9.553±1.10 25.005±11.01 15.087±4.21 43.998±0.00 9.902±5.86 3.593±0.00 13.438±5.07 19.573±1.59 14.454±6.08 15.184±0.72 20.417±0.00
ENST00000306465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171150 ENST00000306503 N/A 2.366±0.00 N/A 0.616±0.00 2.009±0.10 0.355±0.00 0.790±0.00 0.249±0.00 N/A 1.480±0.00 N/A 2.670±1.45 1.037±0.46 1.413±0.62
ENST00000394861 2.931±0.00 2.772±0.00 0.956±0.00 3.657±0.62 2.440±0.40 3.250±0.10 1.765±0.34 1.009±0.08 2.409±1.74 2.030±0.37 1.483±0.39 3.727±0.89 1.774±0.57 3.987±1.91
ENSG00000279254 ENST00000622979 0.007±0.00 0.099±0.00 0.160±0.00 0.183±0.01 0.198±0.03 N/A N/A 0.032±0.00 0.080±0.07 0.032±0.00 N/A 0.167±0.13 0.036±0.01 0.148±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024146 ENSMUST00000024959 12.633±3.07 4.390±1.28 29.806±0.83 20.262±12.62 11.400±3.67 7.425±1.19 9.646±1.02 15.730±4.32 14.157±6.18 12.499±1.80 18.053±0.78 7.119±7.21 22.775±11.68 25.712±10.00
ENSMUST00000160269 N/A 0.604±0.00 N/A 13.990±0.00 1.449±0.00 N/A N/A N/A 4.215±0.26 N/A 5.361±1.27 7.968±5.18 17.968±3.92 10.875±1.10
ENSMUST00000160824 N/A 1.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037104 ENSMUST00000041369 1.071±0.05 12.820±1.16 N/A 4.501±0.31 5.176±2.52 4.598±0.10 4.867±1.36 6.416±0.00 0.781±0.50 6.261±4.84 1.536±0.85 7.982±3.12 0.474±0.04 0.569±0.01
ENSMUSG00000071035 ENSMUST00000090731 1.407±0.56 0.347±0.20 0.827±0.03 1.634±0.22 0.571±0.19 0.370±0.11 1.045±0.38 0.883±0.21 0.824±0.38 0.472±0.27 0.120±0.07 0.500±0.36 0.538±0.31 0.842±0.24
ENSMUSG00000087736 ENSMUST00000157111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.711±1.66 N/A N/A

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