C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 180
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000238936 TMEM180-001 ENSG00000138111 9606 + 10:102461395-102477045 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000238936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000238936 1.690±0.00 0.519±0.00 0.675±0.00 1.595±0.37 0.406±0.02 0.321±0.03 0.377±0.24 0.722±0.26 1.089±0.00 0.363±0.02 0.267±0.00 1.333±0.72 1.081±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WL CIL_0005WL_0001 CGP 10:102461395-102502711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086969 Tmem180-001 protein_coding Mus_musculus 0 1768
ENSMUST00000128041 Tmem180-003 protein_coding Mus_musculus 0 1768
ENSMUST00000142994 Tmem180-002 nonsense_mediated_decay Mus_musculus 0 1016
ENSMUST00000137143 Tmem180-004 retained_intron Mus_musculus 0 821
ENSMUST00000128455 Tmem180-005 protein_coding Mus_musculus 0 477

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