C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 180
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086969 Tmem180-001 ENSMUSG00000025227 10090 + 19:46356880-46375252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086969 3.929±0.83 8.440±1.37 1.279±0.25 3.022±1.36 2.536±1.08 10.355±2.67 1.090±0.22 9.724±1.17 5.035±1.97 4.185±0.62 0.214±0.00 8.817±3.10 12.026±11.26 8.776±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0002 VISTA 19:46318498-46919738
CIL_0005WL CIL_0005WL_0002 CGP 19:46341121-46395735

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238936 TMEM180-001 protein_coding Homo_sapiens 0 1768

Loading