C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase B domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000240617 PLBD1-001 ENSG00000121316 9606 - 12:14503661-14568349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000240617
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000240617 3.156±0.00 1.611±0.00 0.336±0.00 6.474±2.07 4.787±0.00 2.355±1.20 3.493±1.98 6.793±0.00 1.036±0.58 15.826±12.60 4.183±1.62 3.312±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096F CIL_00096F_0001 VISTA 12:13956439-14558986
CIL_00082T CIL_00082T_0001 VISTA 12:13957329-14561410
CIL_0003H6 CIL_0003H6_0001 CGP 12:14365632-14568349
CIL_0003HC CIL_0003HC_0001 CGP 12:14503661-14696585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0005829 TAS cytosol
GO:0006644 TAS phospholipid metabolic process
GO:0016042 IEA lipid catabolic process
GO:0016787 IEA hydrolase activity
GO:0036149 TAS phosphatidylinositol acyl-chain remodeling
GO:0036151 TAS phosphatidylcholine acyl-chain remodeling
GO:0036152 TAS phosphatidylethanolamine acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032336 Plbd1-001 protein_coding Mus_musculus 0 1279
ENSMUST00000137139 Plbd1-002 retained_intron Mus_musculus 0 1075
ENSMUST00000133911 Plbd1-003 retained_intron Mus_musculus 0 348

Loading