C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase B domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032336 Plbd1-001 ENSMUSG00000030214 10090 - 6:136612070-136661928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032336 23.244±7.95 7.534±1.67 5.888±1.12 0.155±0.08 26.362±5.02 28.167±4.14 13.250±1.03 9.680±0.84 11.212±5.91 12.033±1.70 8.079±0.92 16.174±4.80 59.118±34.65 15.421±4.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096F CIL_00096F_0002 VISTA 6:136167244-136769677
CIL_00082T CIL_00082T_0002 VISTA 6:136168119-136771874
CIL_0003H6 CIL_0003H6_0002 CGP 6:136518802-136661928
CIL_0003HC CIL_0003HC_0002 CGP 6:136612070-136781765

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005764 IEA lysosome
GO:0008150 ND biological_process
GO:0016042 IEA lipid catabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240617 PLBD1-001 protein_coding Homo_sapiens 0 1279
ENST00000540572 PLBD1-003 protein_coding Homo_sapiens 0 316
ENST00000541618 PLBD1-002 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000541800 PLBD1-004 retained_intron Homo_sapiens 0 477

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