C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000244751 CPNE5-001 ENSG00000124772 9606 - 6:36740778-36840002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000244751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000244751 0.442±0.00 0.905±0.00 0.276±0.00 7.178±5.66 0.093±0.00 1.016±0.00 3.682±2.79 0.059±0.04 0.285±0.00 0.196±0.00 1.238±0.81 0.316±0.17 3.831±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YC CIL_0002YC_0001 CGP 6:36697851-36840002
CIL_0002Y7 CIL_0002Y7_0001 CGP 6:36740775-36875024

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0008150 ND biological_process
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024805 Cpne5-001 protein_coding Mus_musculus 0 2361
ENSMUST00000126993 Cpne5-004 processed_transcript Mus_musculus 0 1458
ENSDART00000126071 cpne5-202 protein_coding Danio_rerio 0 896
ENSDART00000104503 cpne5-201 protein_coding Danio_rerio 0 896
ENSDART00000050098 cpne5-001 protein_coding Danio_rerio 0 896
ENSMUST00000137727 Cpne5-003 protein_coding Mus_musculus 0 632
ENSMUST00000126755 Cpne5-002 retained_intron Mus_musculus 0 276
ENSMUST00000124917 Cpne5-005 processed_transcript Mus_musculus 0 206

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