C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024805 Cpne5-001 ENSMUSG00000024008 10090 - 17:29156550-29237797 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverLungOvaryPlacentaTestisENSMUST00000024805
Transcript ID Adrenal Brain Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000024805 0.142±0.09 1.885±1.32 0.065±0.01 0.275±0.02 0.012±0.00 0.417±0.00 0.508±0.05 0.229±0.13 0.390±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0002YC CIL_0002YC_0002 CGP 17:29135056-29237797
CIL_0002Y7 CIL_0002Y7_0002 CGP 17:29156550-29264158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000055274 protein_coding Danio_rerio 0 728
ENSDART00000127507 protein_coding Danio_rerio 0 309
ENST00000244751 CPNE5-001 protein_coding Homo_sapiens 0 2361
ENST00000393189 CPNE5-201 protein_coding Homo_sapiens 0 1179
ENST00000459703 CPNE5-002 processed_transcript Homo_sapiens 0 1014
ENST00000493411 CPNE5-003 processed_transcript Homo_sapiens 0 503

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