C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cilia and flagella associated protein 61
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000245957 CFAP61-004 ENSG00000089101 9606 + 20:20052552-20360702 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungTestisENST00000245957
Transcript ID Lung Testis
ENST00000245957 1.781±0.00 7.846±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z5 CIL_0007Z5_0001 VISTA 20:19702996-20303586
CIL_0002MS CIL_0002MS_0001 CGP 20:20017116-20056046
CIL_0001TY CIL_0001TY_0001 CGP 20:20034368-20360702
CIL_0003Q7 CIL_0003Q7_0001 CGP 20:20052514-20370949

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133433 4930529M08Rik-004 protein_coding Mus_musculus 0 2425
ENSMUST00000144066 4930529M08Rik-005 processed_transcript Mus_musculus 0 1585
ENSMUST00000126415 4930529M08Rik-001 protein_coding Mus_musculus 0 763
ENSMUST00000150771 4930529M08Rik-011 retained_intron Mus_musculus 0 737
ENSMUST00000125223 4930529M08Rik-012 protein_coding Mus_musculus 0 667
ENSMUST00000116398 4930529M08Rik-006 protein_coding Mus_musculus 0 647
ENSMUST00000155214 4930529M08Rik-010 processed_transcript Mus_musculus 0 619
ENSMUST00000130168 4930529M08Rik-008 protein_coding Mus_musculus 0 510
ENSMUST00000118002 4930529M08Rik-002 protein_coding Mus_musculus 0 494
ENSMUST00000152515 4930529M08Rik-009 protein_coding Mus_musculus 0 337
ENSMUST00000138774 4930529M08Rik-003 protein_coding Mus_musculus 3e-34 152

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