C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003Q7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089101-ENSG00000173404 CGP 9606 20:20052514-20370949
GeneTranscriptPositionBiotype
ENSG00000089101 (CFAP61)
cilia and flagella associated protein 61
ENST00000245957 (CFAP61-004) 20052552-20360702 protein_coding
ENST00000340348 (CFAP61-014) 20052514-20166441 protein_coding
ENST00000377293 (CFAP61-005) 20221940-20265833 protein_coding
ENST00000377303 (CFAP61-016) 20052558-20075616 protein_coding
ENST00000377306 (CFAP61-007) 20052552-20172336 protein_coding
ENST00000377308 (CFAP61-003) 20225461-20360698 nonsense_mediated_decay
ENST00000389656 (CFAP61-201) 20228246-20265616 protein_coding
ENST00000431753 (CFAP61-010) 20169379-20228447 protein_coding
ENST00000442372 (CFAP61-008) 20085462-20166428 nonsense_mediated_decay
ENST00000451767 (CFAP61-202) 20056646-20172333 protein_coding
ENST00000468719 (CFAP61-011) 20196653-20251763 processed_transcript
ENST00000469994 (CFAP61-021) 20290302-20322814 processed_transcript
ENST00000471716 (CFAP61-020) 20184561-20196714 processed_transcript
ENST00000472660 (CFAP61-019) 20073892-20098749 protein_coding
ENST00000475466 (CFAP61-017) 20052579-20075224 protein_coding
ENST00000476414 (CFAP61-012) 20196653-20251763 processed_transcript
ENST00000486624 (CFAP61-002) 20226087-20228614 processed_transcript
ENST00000488640 (CFAP61-006) 20262971-20290357 processed_transcript
ENST00000493330 (CFAP61-001) 20220129-20225322 processed_transcript
ENST00000494029 (CFAP61-018) 20052558-20074378 nonsense_mediated_decay
ENST00000497372 (CFAP61-013) 20220167-20232926 processed_transcript
ENSG00000173404 (INSM1)
insulinoma-associated 1
ENST00000310227 (INSM1-001) 20368121-20370949 protein_coding
ENSG00000225417 (RP5-1178H5.2)
ENST00000443692 (RP5-1178H5.2-001) 20214299-20215262 antisense
ENSG00000229500 (RPL17P1)
ribosomal protein L17 pseudogene 1
ENST00000445304 (RPL17P1-001) 20253303-20253838 processed_pseudogene
ENSG00000241054 (RP5-1002M8.4)
ENST00000470758 (RP5-1002M8.4-001) 20094401-20095684 antisense
ENSG00000243810 (RP5-1096J16.1)
ENST00000460400 (RP5-1096J16.1-001) 20258407-20267809 antisense
ENSG00000264879 (RN7SL690P)
RNA, 7SL, cytoplasmic 690, pseudogene
ENST00000582087 (RN7SL690P-201) 20316755-20316994 misc_RNA
ENSG00000280229 (RP11-470C13.4)
ENST00000623641 (RP11-470C13.4-001) 20363691-20365657 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003Q7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037143-ENSMUSG00000068154 CGP 10090 2:145934784-146225020
GeneTranscriptPositionBiotype
ENSMUSG00000001767 (Crnkl1)
Crn, crooked neck-like 1 (Drosophila)
ENSMUST00000001818 (Crnkl1-001) 145917479-145935014 protein_coding
ENSMUST00000145425 (Crnkl1-003) 145930392-145931391 processed_transcript
ENSMUST00000147904 (Crnkl1-002) 145931972-145934714 processed_transcript
ENSMUSG00000068154 (Insm1)
insulinoma-associated 1
ENSMUST00000089257 (Insm1-001) 146221921-146225020 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Q7_0001ENSG00000089101ENST00000245957ENST00000340348ENST00000377293ENST00000377303ENST00000377306ENST00000377308ENST00000389656ENST00000431753ENST00000442372ENST00000451767ENST00000468719ENST00000469994ENST00000471716ENST00000472660ENST00000475466ENST00000476414ENST00000486624ENST00000488640ENST00000493330ENST00000494029ENST00000497372ENSG00000173404ENST00000310227ENSG00000225417ENST00000443692ENSG00000229500ENST00000445304ENSG00000241054ENST00000470758ENSG00000243810ENST00000460400ENSG00000264879ENST00000582087ENSG00000280229ENST00000623641CIL_0003Q7_0002ENSMUSG00000001767ENSMUST00000001818ENSMUST00000145425ENSMUST00000147904ENSMUSG00000068154ENSMUST00000089257
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Q7_0001ENSG00000089101ENST00000245957ENST00000472660ENSG00000173404ENST00000310227ENSG00000225417ENST00000443692ENSG00000229500ENST00000445304ENSG00000241054ENST00000470758ENSG00000243810ENST00000460400ENSG00000264879ENST00000582087ENSG00000280229ENST00000623641CIL_0003Q7_0002ENSMUSG00000001767ENSMUST00000001818ENSMUST00000145425ENSMUST00000147904ENSMUSG00000068154ENSMUST00000089257
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089101 ENST00000245957 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.781±0.00 N/A N/A N/A 7.846±0.72
ENST00000340348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.275±0.00 N/A N/A N/A
ENST00000475466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173404 ENST00000310227 N/A 0.026±0.00 N/A 0.709±0.47 0.043±0.00 0.289±0.19 0.009±0.00 0.009±0.00 N/A 0.136±0.08 N/A 0.069±0.04 N/A 0.838±0.18
ENSG00000225417 ENST00000443692 N/A N/A N/A N/A N/A N/A 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000229500 ENST00000445304 0.026±0.00 0.027±0.00 0.243±0.00 N/A 0.110±0.00 N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A 0.169±0.00
ENSG00000241054 ENST00000470758 N/A N/A N/A 0.038±0.00 N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A N/A 0.492±0.23
ENSG00000243810 ENST00000460400 0.068±0.00 N/A N/A 0.122±0.00 0.076±0.00 N/A 0.065±0.00 N/A N/A 0.297±0.00 N/A N/A 0.186±0.00 0.131±0.00
ENSG00000264879 ENST00000582087 0.491±0.00 0.892±0.00 N/A 0.196±0.00 1.336±0.00 0.257±0.00 0.633±0.00 0.835±0.00 N/A 0.091±0.00 0.231±0.00 N/A N/A 0.153±0.01
ENSG00000280229 ENST00000623641 N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001767 ENSMUST00000001818 2.443±1.19 1.931±0.41 3.706±1.47 7.887±0.97 1.670±0.43 1.597±0.74 2.110±0.50 1.936±0.64 2.336±1.38 2.595±1.20 3.683±0.36 7.193±3.90 9.086±7.94 8.401±4.50
ENSMUST00000145425 N/A N/A N/A N/A 2.643±0.26 3.414±0.61 N/A 3.637±0.04 2.128±0.34 N/A N/A 9.588±1.86 N/A N/A
ENSMUST00000147904 N/A N/A N/A N/A 4.386±0.86 3.574±0.83 N/A N/A N/A N/A N/A 8.993±0.00 N/A N/A
ENSMUSG00000068154 ENSMUST00000089257 0.012±0.00 4.203±1.68 0.021±0.00 17.317±13.64 2.292±1.59 2.162±0.28 0.010±0.00 0.072±0.04 0.035±0.06 0.116±0.06 0.147±0.00 0.308±0.16 0.035±0.02 0.015±0.01

Loading