C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002536-ENSDARG00000076657 CGP 7955 23:7622362-7668288
GeneTranscriptPositionBiotype
ENSDARG00000002536 (tm9sf4)
transmembrane 9 superfamily protein member 4 		ENSDART00000006765 (tm9sf4-001) 7622362-7652457 protein_coding
ENSDART00000011554 (tm9sf4-201) 7622479-7652415 protein_coding
ENSDARG00000076657 (plagl2)
pleiomorphic adenoma gene-like 2 		ENSDART00000115298 (plagl2-001) 7665574-7668288 protein_coding
ENSDARG00000084730 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120130 (5S_rRNA.801-201) 7654751-7654867 rRNA
CIL_00071B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101337-ENSG00000126003 CGP 9606 20:32109506-32207791
GeneTranscriptPositionBiotype
ENSG00000101337 (TM9SF4)
transmembrane 9 superfamily protein member 4 		ENST00000217315 (TM9SF4-001) 32109736-32167258 protein_coding
ENST00000398022 (TM9SF4-002) 32109506-32167258 protein_coding
ENST00000417389 (TM9SF4-007) 32109767-32141606 nonsense_mediated_decay
ENST00000442842 (TM9SF4-006) 32109717-32141785 nonsense_mediated_decay
ENST00000450829 (TM9SF4-005) 32109728-32141827 nonsense_mediated_decay
ENST00000479591 (TM9SF4-008) 32161093-32165587 retained_intron
ENST00000495749 (TM9SF4-004) 32159143-32167258 retained_intron
ENSG00000126003 (PLAGL2)
pleiomorphic adenoma gene-like 2 		ENST00000246229 (PLAGL2-001) 32192503-32207791 protein_coding
ENSG00000224452 (RSL24D1P6)
ribosomal L24 domain containing 1 pseudogene 6 		ENST00000426934 (RSL24D1P6-001) 32170390-32170790 processed_pseudogene
ENSG00000265736 (AL049539.1)
 ENST00000583886 (AL049539.1-201) 32118654-32118751 miRNA
ENSG00000275576 (RP5-836N17.4)
 ENST00000611964 (RP5-836N17.4-001) 32116171-32116629 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071B_0001ENSDARG00000002536ENSDART00000006765ENSDART00000011554ENSDARG00000076657ENSDART00000115298ENSDARG00000084730ENSDART00000120130CIL_00071B_0002ENSG00000101337ENST00000217315ENST00000398022ENST00000417389ENST00000442842ENST00000450829ENST00000479591ENST00000495749ENSG00000126003ENST00000246229ENSG00000224452ENST00000426934ENSG00000265736ENST00000583886ENSG00000275576ENST00000611964
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071B_0001ENSDARG00000002536ENSDART00000006765ENSDART00000011554ENSDARG00000076657ENSDART00000115298ENSDARG00000084730ENSDART00000120130CIL_00071B_0002ENSG00000101337ENST00000217315ENST00000398022ENSG00000126003ENST00000246229ENSG00000224452ENST00000426934ENSG00000265736ENST00000583886ENSG00000275576ENST00000611964
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002536 ENSDART00000006765 N/A N/A N/A 4.464±0.00 N/A N/A N/A N/A 5.822±0.00 N/A 2.073±0.00 N/A N/A N/A
ENSDART00000011554 N/A N/A N/A 4.522±0.00 N/A N/A N/A 0.308±0.01 2.120±0.00 N/A 1.970±0.00 N/A N/A N/A
ENSDARG00000076657 ENSDART00000115298 N/A N/A N/A 0.255±0.03 N/A N/A 1.833±0.03 N/A 0.074±0.00 N/A 0.324±0.00 N/A N/A N/A
ENSDARG00000084730 ENSDART00000120130 N/A N/A N/A N/A N/A N/A N/A N/A 1.011±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101337 ENST00000217315 11.655±0.00 8.857±0.00 N/A 5.636±4.10 8.919±0.00 1.983±0.00 9.309±0.00 7.742±0.00 12.999±0.00 16.072±0.00 14.935±0.00 14.224±7.05 15.924±1.47 7.856±1.35
ENST00000398022 7.072±0.00 8.218±0.00 2.090±0.00 5.914±0.74 7.050±0.62 7.171±1.93 1.766±0.00 7.438±1.54 4.343±0.00 2.664±0.00 N/A 12.430±8.33 12.347±2.65 6.472±4.58
ENST00000417389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000126003 ENST00000246229 1.409±0.00 2.275±0.00 1.731±0.00 1.499±0.00 1.396±0.00 1.661±0.00 1.626±1.56 1.417±1.14 0.623±0.02 2.242±1.62 2.107±1.09 6.342±4.44 1.424±0.39 6.352±1.48
ENSG00000224452 ENST00000426934 0.105±0.00 0.032±0.00 N/A 0.134±0.00 0.050±0.00 N/A 0.343±0.00 N/A 0.210±0.00 0.658±0.59 0.151±0.00 0.393±0.35 0.108±0.01 0.123±0.04
ENSG00000265736 ENST00000583886 N/A 1.360±0.00 N/A 0.292±0.00 1.424±0.00 3.285±0.00 N/A 0.281±0.00 0.520±0.00 1.760±0.00 N/A 22.430±0.00 N/A 1.112±0.00
ENSG00000275576 ENST00000611964 N/A 0.264±0.00 0.195±0.00 0.030±0.00 0.475±0.45 0.845±0.00 N/A 0.374±0.00 1.150±0.00 1.245±0.00 N/A 1.854±0.00 N/A 0.184±0.00

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