C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uroporphyrinogen decarboxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000246337 UROD-001 ENSG00000126088 9606 + 1:45012147-45015575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000246337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000246337 31.233±0.00 52.236±0.00 3.636±0.00 20.979±11.09 34.493±29.96 11.380±7.55 8.840±3.03 24.600±4.84 29.021±20.36 17.222±9.57 14.298±0.83 39.922±31.91 44.037±10.12 51.703±1.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004853 IDA:IEA uroporphyrinogen decarboxylase activity
GO:0005829 TAS cytosol
GO:0006778 TAS porphyrin-containing compound metabolic process
GO:0006779 IEA porphyrin-containing compound biosynthetic process
GO:0006782 IEA protoporphyrinogen IX biosynthetic process
GO:0006783 IC heme biosynthetic process
GO:0042168 IEA heme metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030446 Urod-001 protein_coding Mus_musculus 0 1395
ENSMUST00000123079 Urod-007 retained_intron Mus_musculus 0 767
ENSMUST00000150370 Urod-008 retained_intron Mus_musculus 0 601
ENSMUST00000127635 Urod-005 retained_intron Mus_musculus 0 597
ENSMUST00000139209 Urod-003 retained_intron Mus_musculus 0 342
ENSMUST00000130273 Urod-011 protein_coding Mus_musculus 0 333
ENSMUST00000139816 Urod-002 retained_intron Mus_musculus 0 278
ENSMUST00000135164 Urod-006 retained_intron Mus_musculus 0 255
ENSMUST00000134598 Urod-009 retained_intron Mus_musculus 0 220
ENSMUST00000153629 Urod-010 processed_transcript Mus_musculus 2e-26 124

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