C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 4, member M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248228 CLEC4M-201 ENSG00000104938 9606 + 19:7763149-7769604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLiverLungOvaryPlacentaTestisENST00000248228
Transcript ID Adrenal Kidney Liver Lung Ovary Placenta Testis
ENST00000248228 29.055±0.00 9.538±0.00 6.497±5.70 1.575±0.00 0.526±0.43 2.839±1.80 0.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VX CIL_0002VX_0001 CGP 19:7739994-7769605

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 NAS receptor activity
GO:0005537 IEA mannose binding
GO:0005576 IEA extracellular region
GO:0005737 NAS cytoplasm
GO:0005887 TAS integral component of plasma membrane
GO:0006897 IEA endocytosis
GO:0007159 NAS leukocyte cell-cell adhesion
GO:0009988 TAS cell-cell recognition
GO:0010468 IMP regulation of gene expression
GO:0016020 TAS membrane
GO:0019048 TAS modulation by virus of host morphology or physiology
GO:0019062 TAS virion attachment to host cell
GO:0019079 NAS viral genome replication
GO:0019882 NAS antigen processing and presentation
GO:0030193 IMP regulation of blood coagulation
GO:0030246 IEA:NAS carbohydrate binding
GO:0030369 NAS ICAM-3 receptor activity
GO:0035556 NAS intracellular signal transduction
GO:0042605 NAS peptide antigen binding
GO:0045087 IEA innate immune response
GO:0046790 TAS virion binding
GO:0046872 IEA metal ion binding
GO:0046968 NAS peptide antigen transport
GO:0075733 TAS intracellular transport of virus

Homologs

No Homologs available.

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