C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090659-ENSG00000104938 CGP 9606 19:7739994-7769605
GeneTranscriptPositionBiotype
ENSG00000090659 (CD209)
CD209 molecule 		ENST00000204801 (CD209-014) 7743039-7747511 protein_coding
ENST00000315591 (CD209-005) 7743039-7747511 protein_coding
ENST00000315599 (CD209-001) 7739994-7747534 protein_coding
ENST00000354397 (CD209-002) 7743039-7747511 protein_coding
ENST00000394161 (CD209-012) 7743039-7747511 protein_coding
ENST00000394173 (CD209-009) 7742511-7747564 protein_coding
ENST00000593660 (CD209-007) 7742647-7747511 protein_coding
ENST00000593821 (CD209-004) 7743039-7747511 protein_coding
ENST00000601256 (CD209-008) 7743175-7747511 protein_coding
ENST00000601951 (CD209-003) 7742850-7747518 protein_coding
ENST00000602261 (CD209-006) 7743039-7747511 protein_coding
ENSG00000104938 (CLEC4M)
C-type lectin domain family 4, member M 		ENST00000248228 (CLEC4M-201) 7763149-7769604 protein_coding
ENST00000327325 (CLEC4M-001) 7763149-7769605 protein_coding
ENST00000334806 (CLEC4M-202) 7763149-7769604 protein_coding
ENST00000359059 (CLEC4M-203) 7763149-7769604 protein_coding
ENST00000394122 (CLEC4M-204) 7763149-7769604 protein_coding
ENST00000595496 (CLEC4M-006) 7763267-7768988 protein_coding
ENST00000595751 (CLEC4M-008) 7763244-7766802 protein_coding
ENST00000596363 (CLEC4M-004) 7763217-7769604 protein_coding
ENST00000596707 (CLEC4M-003) 7763267-7768988 protein_coding
ENST00000597522 (CLEC4M-005) 7763267-7768988 protein_coding
ENST00000598879 (CLEC4M-010) 7763267-7768988 retained_intron
ENST00000599333 (CLEC4M-011) 7763267-7768988 retained_intron
ENST00000601089 (CLEC4M-002) 7763262-7768575 retained_intron
ENST00000602143 (CLEC4M-007) 7766594-7769118 retained_intron
ENSG00000242636 (RPL21P129)
ribosomal protein L21 pseudogene 129 		ENST00000491732 (RPL21P129-001) 7750684-7751161 processed_pseudogene
CIL_0002VX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031495-ENSMUSG00000065987 CGP 10090 8:3871827-3926844
GeneTranscriptPositionBiotype
ENSMUSG00000031495 (Cd209d)
CD209d antigen 		ENSMUST00000011445 (Cd209d-201) 3871827-3878555 protein_coding
ENSMUSG00000065987 (Cd209b)
CD209b antigen 		ENSMUST00000084086 (Cd209b-002) 3917657-3926833 protein_coding
ENSMUST00000111014 (Cd209b-001) 3917655-3926844 nonsense_mediated_decay
ENSMUST00000171635 (Cd209b-003) 3918606-3926833 protein_coding
ENSMUST00000188386 (Cd209b-004) 3918677-3926813 protein_coding
CIL_0002VX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040197-ENSMUSG00000031495 CGP 10090 8:3847965-3878555
GeneTranscriptPositionBiotype
ENSMUSG00000031495 (Cd209d)
CD209d antigen 		ENSMUST00000011445 (Cd209d-201) 3871827-3878555 protein_coding
ENSMUSG00000040197 (Cd209e)
CD209e antigen 		ENSMUST00000033888 (Cd209e-001) 3847965-3854309 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VX_0001ENSG00000090659ENST00000204801ENST00000315591ENST00000315599ENST00000354397ENST00000394161ENST00000394173ENST00000593660ENST00000593821ENST00000601256ENST00000601951ENST00000602261ENSG00000104938ENST00000248228ENST00000327325ENST00000334806ENST00000359059ENST00000394122ENST00000595496ENST00000595751ENST00000596363ENST00000596707ENST00000597522ENST00000598879ENST00000599333ENST00000601089ENST00000602143ENSG00000242636ENST00000491732CIL_0002VX_0002ENSMUSG00000031495ENSMUST00000011445ENSMUSG00000065987ENSMUST00000084086ENSMUST00000111014ENSMUST00000171635ENSMUST00000188386CIL_0002VX_0003ENSMUSG00000031495ENSMUST00000011445ENSMUSG00000040197ENSMUST00000033888
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VX_0001ENSG00000090659ENST00000204801ENST00000315599ENST00000354397ENST00000394161ENST00000394173ENST00000593660ENST00000601256ENST00000601951ENSG00000104938ENST00000248228ENST00000327325ENST00000334806ENST00000359059ENST00000595751ENST00000596363ENST00000597522ENST00000598879ENST00000601089ENST00000602143ENSG00000242636ENST00000491732CIL_0002VX_0002ENSMUSG00000031495ENSMUST00000011445ENSMUSG00000065987ENSMUST00000084086ENSMUST00000111014ENSMUST00000171635ENSMUST00000188386CIL_0002VX_0003ENSMUSG00000031495ENSMUST00000011445ENSMUSG00000040197ENSMUST00000033888
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090659 ENST00000204801 N/A N/A N/A N/A 2.189±0.00 1.123±0.00 0.514±0.00 1.634±0.00 4.582±0.00 1.336±0.00 N/A 0.573±0.00 N/A N/A
ENST00000315591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000315599 3.566±0.00 13.458±0.00 0.078±0.00 N/A 1.542±1.03 1.908±0.00 1.173±0.43 N/A 0.876±0.37 0.748±0.17 N/A 0.907±0.00 3.088±1.05 0.076±0.00
ENST00000354397 N/A N/A N/A N/A N/A 0.709±0.00 N/A N/A N/A 1.379±0.00 N/A N/A N/A N/A
ENST00000394161 N/A N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394173 N/A N/A N/A N/A N/A N/A N/A N/A 2.932±0.00 N/A 0.448±0.00 N/A N/A N/A
ENST00000593660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A N/A
ENST00000593821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601256 N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A N/A N/A 0.734±0.00 N/A N/A
ENST00000601951 N/A N/A N/A N/A 0.968±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104938 ENST00000248228 N/A 29.055±0.00 N/A N/A N/A N/A N/A 9.538±0.00 6.497±5.70 1.575±0.00 N/A 0.526±0.43 2.839±1.80 0.442±0.00
ENST00000327325 N/A N/A N/A N/A N/A N/A N/A N/A 1.099±0.00 N/A N/A N/A N/A N/A
ENST00000334806 N/A 24.494±0.00 N/A N/A N/A N/A N/A N/A 10.038±0.00 N/A N/A 1.036±0.24 3.411±0.00 0.745±0.38
ENST00000359059 0.114±0.00 N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.351±0.00
ENST00000394122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595751 N/A N/A N/A N/A N/A N/A 0.029±0.00 6.311±0.00 N/A 0.814±0.00 N/A N/A N/A N/A
ENST00000596363 N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A N/A
ENST00000598879 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 N/A N/A N/A N/A
ENST00000599333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601089 0.077±0.00 N/A 0.016±0.00 0.070±0.06 0.019±0.00 0.068±0.00 0.031±0.00 0.043±0.00 N/A 0.087±0.00 0.005±0.00 0.053±0.00 N/A 0.183±0.00
ENST00000602143 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A 0.978±0.00 N/A 0.344±0.00 4.176±1.95 N/A
ENSG00000242636 ENST00000491732 0.027±0.00 0.198±0.00 N/A 0.057±0.00 0.028±0.00 0.026±0.00 N/A 0.057±0.00 N/A N/A N/A 0.095±0.00 N/A 0.051±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031495 ENSMUST00000011445 5.072±1.64 0.209±0.18 2.208±0.93 0.032±0.00 10.637±4.99 0.198±0.10 0.073±0.00 0.376±0.19 0.007±0.00 0.341±0.17 0.595±0.47 0.420±0.17 0.215±0.24 0.054±0.02
ENSMUSG00000065987 ENSMUST00000084086 2.752±0.60 0.375±0.21 1.392±0.23 N/A 30.800±11.36 0.596±0.13 0.106±0.01 2.946±2.24 0.109±0.07 0.323±0.12 1.514±1.83 0.330±0.11 0.360±0.00 0.059±0.02
ENSMUST00000111014 0.649±0.00 0.166±0.11 N/A 0.004±0.00 N/A 0.073±0.00 0.100±0.04 0.171±0.00 0.060±0.04 0.587±0.00 0.172±0.09 0.176±0.08 N/A 0.018±0.00
ENSMUST00000171635 N/A 0.094±0.00 0.483±0.00 0.007±0.00 N/A 0.109±0.04 0.132±0.00 0.037±0.00 N/A N/A 0.130±0.00 0.399±0.12 N/A 0.039±0.00
ENSMUST00000188386 N/A N/A N/A 0.017±0.00 N/A 0.103±0.00 N/A N/A 0.033±0.00 N/A 0.118±0.00 0.220±0.09 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031495 ENSMUST00000011445 5.072±1.64 0.209±0.18 2.208±0.93 0.032±0.00 10.637±4.99 0.198±0.10 0.073±0.00 0.376±0.19 0.007±0.00 0.341±0.17 0.595±0.47 0.420±0.17 0.215±0.24 0.054±0.02
ENSMUSG00000040197 ENSMUST00000033888 0.134±0.06 N/A 0.061±0.00 0.017±0.00 0.672±0.51 N/A N/A 0.088±0.04 N/A 0.059±0.00 0.054±0.04 0.030±0.02 0.013±0.01 N/A

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