C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000249299 LSM8-001 ENSG00000128534 9606 + 7:118184032-118192824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000249299
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000249299 3.146±0.00 2.008±0.00 2.785±0.63 2.086±0.78 1.804±0.17 3.483±1.72 4.547±2.93 2.639±0.00 1.416±0.09 5.796±1.55 5.721±0.92 5.202±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QX CIL_0003QX_0001 CGP 7:117710651-118192824
CIL_0003QY CIL_0003QY_0001 CGP 7:118184032-118242731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0017070 NAS U6 snRNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

No Homologs available.

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