C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 1 family, member A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000249750 ALDH1A2-001 ENSG00000128918 9606 - 15:57953424-58066418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartLungMuscleOvaryENST00000249750
Transcript ID Adrenal Bladder Breast Heart Lung Muscle Ovary
ENST00000249750 0.395±0.00 0.440±0.00 1.217±0.00 0.582±0.13 3.150±0.00 0.410±0.00 4.231±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000501 CIL_000501_0002 CGP 15:57953424-58497866

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IEA blood vessel development
GO:0001758 ISS retinal dehydrogenase activity
GO:0001822 IEA kidney development
GO:0001889 IEA liver development
GO:0001936 IEA regulation of endothelial cell proliferation
GO:0002138 IEA retinoic acid biosynthetic process
GO:0003007 IEA heart morphogenesis
GO:0004028 ISS 3-chloroallyl aldehyde dehydrogenase activity
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0006776 NAS vitamin A metabolic process
GO:0007494 IEA midgut development
GO:0008152 IEA metabolic process
GO:0008284 IEA positive regulation of cell proliferation
GO:0008285 IDA negative regulation of cell proliferation
GO:0009855 IEA determination of bilateral symmetry
GO:0009952 IEA anterior/posterior pattern specification
GO:0009954 IEA proximal/distal pattern formation
GO:0010628 IEA positive regulation of gene expression
GO:0014032 IEA neural crest cell development
GO:0016331 IEA morphogenesis of embryonic epithelium
GO:0016491 IEA oxidoreductase activity
GO:0016918 ISS retinal binding
GO:0021915 IMP neural tube development
GO:0021983 IEA pituitary gland development
GO:0030182 IEA neuron differentiation
GO:0030324 IEA lung development
GO:0030326 IEA embryonic limb morphogenesis
GO:0030900 IEA forebrain development
GO:0030902 IEA hindbrain development
GO:0031016 IEA pancreas development
GO:0031076 IEA embryonic camera-type eye development
GO:0032355 IEA response to estradiol
GO:0033189 IEA response to vitamin A
GO:0034097 IDA response to cytokine
GO:0035115 IEA embryonic forelimb morphogenesis
GO:0035799 IEA ureter maturation
GO:0042572 IEA retinol metabolic process
GO:0042573 ISS retinoic acid metabolic process
GO:0042574 IEA retinal metabolic process
GO:0042904 IEA 9-cis-retinoic acid biosynthetic process
GO:0043010 IEA camera-type eye development
GO:0043065 IEA positive regulation of apoptotic process
GO:0048384 IEA retinoic acid receptor signaling pathway
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048566 IEA embryonic digestive tract development
GO:0048738 IEA cardiac muscle tissue development
GO:0055114 IEA oxidation-reduction process
GO:0060324 IEA face development
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034723 Aldh1a2-001 protein_coding Mus_musculus 0 2047

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