C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251636 DHX29-001 ENSG00000067248 9606 - 5:55256245-55307722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251636
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251636 4.437±0.00 2.115±0.00 2.964±0.01 2.263±1.14 3.202±0.17 3.739±1.22 2.717±0.00 2.381±0.58 3.479±0.39 0.756±0.40 3.327±1.75 2.272±0.96 6.910±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G0 CIL_0007G0_0002 CGP 5:55256245-55425581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003743 IEA translation initiation factor activity
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006413 IEA translational initiation
GO:0008026 IEA ATP-dependent helicase activity
GO:0016282 IDA eukaryotic 43S preinitiation complex
GO:0043024 IDA ribosomal small subunit binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038574 Dhx29-201 protein_coding Mus_musculus 0 4292
ENSMUST00000112600 Phc1-203 protein_coding Mus_musculus 0.0003 53
ENSMUST00000079560 Phc1-201 protein_coding Mus_musculus 0.0003 53
ENSMUST00000081849 Phc1-202 protein_coding Mus_musculus 0.0003 53
ENSMUST00000161877 Phc1-003 nonsense_mediated_decay Mus_musculus 0.0003 53
ENSMUST00000160163 Phc1-002 nonsense_mediated_decay Mus_musculus 0.0003 53
ENSMUST00000161054 Phc1-001 protein_coding Mus_musculus 0.0003 53
ENSMUST00000159252 Phc1-006 protein_coding Mus_musculus 0.0003 53
ENSMUST00000160696 Phc1-005 protein_coding Mus_musculus 0.0003 53
ENSMUST00000161739 Phc1-004 protein_coding Mus_musculus 0.0003 53

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