C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007G0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040326-ENSDARG00000013457 CGP 7955 10:7177934-7289147
GeneTranscriptPositionBiotype
ENSDARG00000013457 (skiv2l2)
superkiller viralicidic activity 2-like 2 		ENSDART00000026244 (skiv2l2-201) 7220903-7289147 protein_coding
ENSDARG00000040326 (DHX29)
DEAH (Asp-Glu-Ala-His) box polypeptide 29 		ENSDART00000123923 (DHX29-202) 7213414-7220218 protein_coding
ENSDART00000129467 (DHX29-201) 7177934-7220103 protein_coding
ENSDARG00000053381 (PPAP2A)
 ENSDART00000075412 (PPAP2A-201) 7289026-7318348 protein_coding
CIL_0007G0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000067248-ENSG00000039123 CGP 9606 5:55256245-55425581
GeneTranscriptPositionBiotype
ENSG00000039123 (SKIV2L2)
superkiller viralicidic activity 2-like 2 (S. cerevisiae) 		ENST00000230640 (SKIV2L2-001) 55307760-55425581 protein_coding
ENST00000502953 (SKIV2L2-008) 55327530-55343372 retained_intron
ENST00000503165 (SKIV2L2-006) 55308010-55329407 processed_transcript
ENST00000504388 (SKIV2L2-004) 55308001-55324705 processed_transcript
ENST00000504997 (SKIV2L2-005) 55308069-55347129 processed_transcript
ENST00000505565 (SKIV2L2-007) 55322327-55344620 nonsense_mediated_decay
ENST00000506750 (SKIV2L2-002) 55308001-55425106 nonsense_mediated_decay
ENST00000508716 (SKIV2L2-003) 55416056-55424985 protein_coding
ENST00000518955 (SKIV2L2-009) 55405252-55416129 retained_intron
ENSG00000067113 (PPAP2A)
phosphatidic acid phosphatase type 2A 		ENST00000264775 (PPAP2A-001) 55424854-55534969 protein_coding
ENST00000307259 (PPAP2A-002) 55424885-55535050 protein_coding
ENST00000502907 (PPAP2A-003) 55530436-55534964 processed_transcript
ENST00000509667 (PPAP2A-005) 55441906-55534951 nonsense_mediated_decay
ENST00000515132 (PPAP2A-004) 55441906-55534964 processed_transcript
ENST00000520263 (PPAP2A-006) 55441880-55468290 retained_intron
ENSG00000067248 (DHX29)
DEAH (Asp-Glu-Ala-His) box polypeptide 29 		ENST00000251636 (DHX29-001) 55256245-55307722 protein_coding
ENST00000504778 (DHX29-002) 55256249-55307694 retained_intron
ENST00000508346 (DHX29-003) 55295444-55307540 protein_coding
ENST00000513447 (DHX29-004) 55270444-55276360 retained_intron
ENST00000621106 (DHX29-201) 55256246-55307674 protein_coding
ENSG00000271410 (RP11-506H20.2)
 ENST00000605749 (RP11-506H20.2-001) 55356308-55357523 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G0_0001ENSDARG00000013457ENSDART00000026244ENSDARG00000040326ENSDART00000123923ENSDART00000129467ENSDARG00000053381ENSDART00000075412CIL_0007G0_0002ENSG00000039123ENST00000230640ENST00000502953ENST00000503165ENST00000504388ENST00000504997ENST00000505565ENST00000506750ENST00000508716ENST00000518955ENSG00000067113ENST00000264775ENST00000307259ENST00000502907ENST00000509667ENST00000515132ENST00000520263ENSG00000067248ENST00000251636ENST00000504778ENST00000508346ENST00000513447ENST00000621106ENSG00000271410ENST00000605749
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G0_0001ENSDARG00000013457ENSDART00000026244ENSDARG00000040326ENSDART00000123923ENSDART00000129467ENSDARG00000053381ENSDART00000075412CIL_0007G0_0002ENSG00000039123ENST00000230640ENST00000503165ENST00000504997ENST00000506750ENSG00000067113ENST00000264775ENST00000307259ENSG00000067248ENST00000251636ENST00000621106ENSG00000271410ENST00000605749
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013457 ENSDART00000026244 N/A N/A N/A 6.054±0.64 N/A N/A 3.966±2.31 11.561±3.68 1.765±0.00 N/A 3.521±0.00 N/A N/A N/A
ENSDARG00000040326 ENSDART00000123923 N/A N/A N/A 1.822±0.29 N/A N/A 1.551±0.41 N/A 0.276±0.00 N/A N/A N/A N/A N/A
ENSDART00000129467 N/A N/A N/A 0.181±0.00 N/A N/A 0.588±0.00 N/A 0.145±0.00 N/A N/A N/A N/A N/A
ENSDARG00000053381 ENSDART00000075412 N/A N/A N/A N/A N/A N/A 8.722±3.13 29.464±7.17 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000039123 ENST00000230640 N/A N/A N/A 1.546±0.00 N/A N/A 1.462±0.00 N/A 3.123±0.00 1.605±0.00 2.116±0.00 2.728±0.45 2.628±0.00 N/A
ENST00000502953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.517±0.00 N/A N/A
ENST00000504388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504997 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.352±0.00 N/A N/A N/A N/A
ENST00000505565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506750 10.889±0.00 8.786±0.00 4.263±0.00 6.452±2.09 7.070±0.81 7.800±2.27 5.354±2.03 7.224±2.38 4.862±0.90 5.257±2.06 4.805±1.31 7.634±1.80 5.842±0.84 22.066±0.00
ENST00000508716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000067113 ENST00000264775 62.006±0.00 35.537±0.00 N/A 20.187±0.00 69.612±0.00 33.532±0.00 13.398±8.41 27.219±0.00 12.202±0.00 13.586±0.00 8.507±3.77 11.406±0.00 N/A 42.483±0.00
ENST00000307259 92.137±0.00 35.497±0.00 9.984±0.00 18.229±0.00 41.243±23.22 31.758±16.44 25.797±0.00 33.197±24.59 24.866±4.00 22.327±0.00 9.819±0.00 18.095±3.88 41.095±2.71 30.536±0.00
ENST00000502907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000067248 ENST00000251636 4.437±0.00 N/A 2.115±0.00 2.964±0.01 2.263±1.14 3.202±0.17 3.739±1.22 2.717±0.00 2.381±0.58 3.479±0.39 0.756±0.40 3.327±1.75 2.272±0.96 6.910±0.30
ENST00000504778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621106 N/A 2.529±0.00 N/A 1.828±0.00 N/A 1.514±0.00 N/A N/A 2.192±0.00 N/A 1.919±0.51 0.535±0.00 1.152±0.00 1.418±0.15
ENSG00000271410 ENST00000605749 N/A 0.041±0.00 N/A 0.029±0.00 0.157±0.00 0.108±0.00 0.054±0.02 0.014±0.00 0.094±0.00 0.488±0.00 N/A 0.049±0.02 N/A 0.049±0.00

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