C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252011 DHX35-001 ENSG00000101452 9606 + 20:38962335-39039723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000252011
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000252011 1.866±0.00 1.288±0.00 0.996±0.18 1.565±0.10 3.265±0.00 0.378±0.00 1.284±0.26 2.058±0.77 1.050±0.11 2.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LA CIL_0002LA_0001 CGP 20:38926312-39039723
CIL_0008O6 CIL_0008O6_0001 VISTA 20:38948171-39548957
CIL_0006RV CIL_0006RV_0002 CGP 20:38962299-40689240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109478 Dhx35-003 protein_coding Mus_musculus 0 2571
ENSMUST00000145692 Dhx35-002 processed_transcript Mus_musculus 0 2490
ENSMUST00000029186 Dhx35-001 protein_coding Mus_musculus 0 2276
ENSMUST00000146797 Dhx35-004 retained_intron Mus_musculus 0 1312
ENSMUST00000148359 Dhx35-006 processed_transcript Mus_musculus 0 723
ENSMUST00000157070 Dhx35-008 processed_transcript Mus_musculus 0 664
ENSMUST00000156893 Dhx35-007 protein_coding Mus_musculus 0 309
ENSMUST00000143195 Dhx35-009 processed_transcript Mus_musculus 0 211

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