C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 20 open reading frame 194
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252032 C20orf194-001 ENSG00000088854 9606 - 20:3249305-3407625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252032
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252032 4.477±0.00 1.796±0.00 1.747±0.00 7.420±0.78 2.985±0.00 2.769±0.56 5.390±0.00 1.857±1.36 3.076±2.55 2.244±0.61 1.302±0.00 3.075±1.32 2.995±1.13 7.123±2.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000340 CIL_000340_0001 CGP 20:3227417-3407625
CIL_00032V CIL_00032V_0001 CGP 20:3249305-3651122

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044766 4930402H24Rik-001 protein_coding Mus_musculus 0 3892
ENSMUST00000119422 4930402H24Rik-008 protein_coding Mus_musculus 0 3877
ENSMUST00000148924 4930402H24Rik-006 retained_intron Mus_musculus 0 1934
ENSMUST00000144014 4930402H24Rik-007 retained_intron Mus_musculus 0 1254
ENSMUST00000110243 4930402H24Rik-005 protein_coding Mus_musculus 0 800
ENSMUST00000123049 4930402H24Rik-013 processed_transcript Mus_musculus 0 784
ENSMUST00000142128 4930402H24Rik-009 processed_transcript Mus_musculus 0 525
ENSMUST00000138990 4930402H24Rik-015 protein_coding Mus_musculus 0 499
ENSMUST00000148932 4930402H24Rik-002 processed_transcript Mus_musculus 0 394
ENSMUST00000138758 4930402H24Rik-003 protein_coding Mus_musculus 0 388
ENSMUST00000120316 4930402H24Rik-017 protein_coding Mus_musculus 0 387
ENSMUST00000146975 4930402H24Rik-016 protein_coding Mus_musculus 0 255
ENSMUST00000139684 4930402H24Rik-004 nonsense_mediated_decay Mus_musculus 0 244

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