C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitination factor E4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252108 UBE4A-001 ENSG00000110344 9606 + 11:118359585-118399211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252108
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252108 5.320±0.00 3.769±0.00 2.031±0.00 7.156±0.70 4.152±0.15 3.776±1.09 3.928±0.29 3.338±0.02 2.628±0.85 2.154±0.54 6.776±0.00 4.501±1.68 4.358±1.98 6.266±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0001 VISTA 11:118137591-118740525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0034450 IEA ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117549 Ube4a-005 protein_coding Mus_musculus 0 4348
ENSMUST00000145657 Ube4a-001 nonsense_mediated_decay Mus_musculus 0 3740
ENSMUST00000117506 Ube4a-003 protein_coding Mus_musculus 0 3310
ENSMUST00000154287 Ube4a-004 nonsense_mediated_decay Mus_musculus 0 2010
ENSMUST00000138559 Ube4a-002 retained_intron Mus_musculus 0 1358
ENSMUST00000125642 Ube4a-007 protein_coding Mus_musculus 0 442
ENSMUST00000155400 Ube4a-006 retained_intron Mus_musculus 0 246

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