C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase short-chain family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253382 ACSS2-006 ENSG00000131069 9606 + 20:34876614-34927962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleTestisENST00000253382
Transcript ID Heart Muscle Testis
ENST00000253382 15.906±13.87 29.479±18.65 2.575±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BC CIL_0005BC_0001 CGP 20:34844720-34927962
CIL_0005BF CIL_0005BF_0001 CGP 20:34872146-34955817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003987 IDA acetate-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006069 TAS ethanol oxidation
GO:0006085 IEA acetyl-CoA biosynthetic process
GO:0006805 TAS xenobiotic metabolic process
GO:0008152 IEA metabolic process
GO:0008610 IMP lipid biosynthetic process
GO:0016208 IC AMP binding
GO:0019413 IEA acetate biosynthetic process
GO:0019427 IEA acetyl-CoA biosynthetic process from acetate
GO:0019542 IEA propionate biosynthetic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103142 Acss2-003 protein_coding Mus_musculus 0 2826
ENSMUST00000029135 Acss2-001 protein_coding Mus_musculus 0 1764
ENSMUST00000133654 Acss2-004 nonsense_mediated_decay Mus_musculus 0 1753
ENSMUST00000065973 Acss2-008 protein_coding Mus_musculus 0 1589
ENSMUST00000131054 Acss2-005 retained_intron Mus_musculus 0 593
ENSMUST00000151781 Acss2-002 protein_coding Mus_musculus 0 538
ENSMUST00000149788 Acss2-006 retained_intron Mus_musculus 0 468
ENSMUST00000143169 Acss2-007 retained_intron Mus_musculus 0 219

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