C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCO1 cytochrome c oxidase assembly protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000255390 SCO1-001 ENSG00000133028 9606 - 17:10672474-10697568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000255390
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000255390 1.197±0.00 2.025±0.00 0.678±0.00 1.312±0.30 1.210±0.44 1.433±0.36 1.065±0.69 2.083±0.28 1.775±0.00 0.425±0.24 0.885±0.41 0.951±0.63 1.316±0.31 1.082±0.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 IEA copper ion binding
GO:0005739 TAS mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006091 TAS generation of precursor metabolites and energy
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008535 IEA respiratory chain complex IV assembly
GO:0016209 IEA antioxidant activity
GO:0016491 IEA oxidoreductase activity
GO:0030016 IDA myofibril
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092996 Sco1-001 protein_coding Mus_musculus 0 747
ENSMUST00000108690 Sco1-002 protein_coding Mus_musculus 0 684
ENSMUST00000136984 Sco1-003 processed_transcript Mus_musculus 0 340
ENSMUST00000137779 Sco1-004 processed_transcript Mus_musculus 0 320
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000002 68
ENSMUST00000123721 Hhat-003 processed_transcript Mus_musculus 0.0002 55

Loading