C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: doublecortin-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000255448 DCLK1-006 ENSG00000133083 9606 - 13:35771341-36131306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000255448
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000255448 1.592±0.00 0.445±0.00 15.994±4.26 1.119±0.00 3.045±0.00 1.152±0.00 0.275±0.00 3.155±0.00 0.378±0.17 0.212±0.02 0.884±0.93 0.014±0.00 1.650±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UJ CIL_0008UJ_0001 VISTA 13:35198777-35801835
CIL_0000P9 CIL_0000P9_0002 CGP 13:35474182-36131306

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0004672 TAS:IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005057 TAS receptor signaling protein activity
GO:0005524 IEA ATP binding
GO:0005887 TAS integral component of plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0007399 TAS nervous system development
GO:0007409 IEA axonogenesis
GO:0007417 TAS central nervous system development
GO:0007420 IEA brain development
GO:0009615 IEP response to virus
GO:0016197 NAS endosomal transport
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0021952 IEA central nervous system projection neuron axonogenesis
GO:0030900 IEA forebrain development
GO:0035556 IEA intracellular signal transduction
GO:0048675 IEA axon extension
GO:0048813 IEA dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070418 Dclk1-202 protein_coding Mus_musculus 0 2362
ENSMUST00000054237 Dclk1-201 protein_coding Mus_musculus 0 1459
ENSMUST00000167204 Dclk1-203 protein_coding Mus_musculus 0 1358
ENSDART00000073603 DCLK2 (2 of 2)-201 protein_coding Danio_rerio 0 204
ENSDART00000149748 DCLK2 (2 of 2)-001 protein_coding Danio_rerio 0 204
ENSDART00000145450 dclk1a-001 protein_coding Danio_rerio 0.000000000006 79

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